New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 575949126 (0.600)10 (0.300) 9/202 2.7 30.9% intergenic (+44/+112) trmL/secB tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB
?NC_002947 = 5759519 25 (0.760)intergenic (+72/+84) trmL/secB tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB

CCGATGCGGCCGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGC  >  NC_002947/5759352‑5759636
                                                                                                                                           |                                                                                                                                                 
ccGATGCGGCCGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAg                                                                                                                                         <  1:13740/150‑1 (MQ=255)
ccGATGCGGCCGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGACTTTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAg                                                                                                                                         <  1:899485/150‑1 (MQ=255)
      cGGCCGGGGTGCCGTAGCCTGACCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACg                                                                                                                                   <  2:536110/150‑1 (MQ=255)
        gCCGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAACCCCGCTCCTACaggggattgcgccgttcc                                                                                                                                 >  2:536209‑M1/1‑132 (MQ=255)
         ccGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccc                                                                                                                                >  1:103721‑M1/1‑131 (MQ=255)
           ggggTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCa                                                                                                                              <  2:451214/150‑1 (MQ=255)
                        cTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtagga                                                                                                                 <  2:103721‑M1/150‑35 (MQ=255)
                           aaCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcg                                                                                                              <  1:635280‑M1/150‑38 (MQ=255)
                            aCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgg                                                                                                             <  2:276363‑M1/150‑39 (MQ=255)
                            aCCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgg                                                                                                             <  1:536209‑M1/150‑39 (MQ=255)
                             ccTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcggg                                                                                                            <  2:1000209‑M1/150‑40 (MQ=255)
                                 tCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgta                                                                                                                    >  2:916246‑M2/1‑135 (MQ=255)
                                 tCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgta                                                                                                                    <  1:916246‑M2/138‑4 (MQ=255)
                                   cAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacc                                                                                                      <  1:745919‑M2/150‑18 (MQ=255)
                                           gggcGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGCGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaaga                                                                                              >  2:347982‑M2/2‑125 (MQ=255)
                                            ggCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagag                                                                                             >  1:554876‑M2/1‑124 (MQ=255)
                                             gCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGACGCAATCCCCTgtaggagcgggtttacccgcgaagagg                                                                                            >  2:622601‑M2/1‑123 (MQ=255)
                                                     ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgg                                                                                                             <  2:834455‑M2/125‑11 (MQ=255)
                                                     ggTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgg                                                                                                             >  1:834455‑M2/1‑115 (MQ=255)
                                                       gggatgaGGGGTGGCGGCAGAACGGGTTTGCAGGGACCTGATGTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCGTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacagg                                                                                  <  1:601114‑M1/147‑66 (MQ=255)
                                                           tGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGcaac                                                                              >  1:541676/1‑150 (MQ=255)
                                                                       gcAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGccc                                                                  >  2:678749/1‑150 (MQ=255)
                                                                                 tttGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggttt                                                                                                         <  1:580569‑M1/101‑43 (MQ=255)
                                                                                 tttGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggttt                                                                                                         >  2:580569‑M1/1‑59 (MQ=255)
                                                                                 tttGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGgcgc                                                        <  2:745919/150‑1 (MQ=255)
                                                                                   tGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCtt                                                      <  1:678749/150‑1 (MQ=255)
                                                                                       gggAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCTGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCtt                                                  <  1:451921/150‑1 (MQ=255)
                                                                                         gAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaa                                                                                                >  1:605340‑M2/1‑79 (MQ=255)
                                                                                         gAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaa                                                                                                <  2:605340‑M2/102‑24 (MQ=255)
                                                                                             tGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcggg                                                                                                            >  2:435901‑M2/1‑75 (MQ=255)
                                                                                             tGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcggg                                                                                                            <  1:435901‑M2/86‑12 (MQ=255)
                                                                                                     tGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTaa                                    <  2:541676/150‑1 (MQ=255)
                                                                                                       ccTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtacgagcgggtttacccgcgaagaggcccgcgccggcaacacatcaggtccctgcaaacccgttctgccgccacccctcatccc                                  <  1:601114‑M2/150‑86 (MQ=255)
                                                                                                        cTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGgc                                                                                                                                 <  1:161646/54‑1 (MQ=255)
                                                                                                        cTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGgc                                                                                                                                 >  2:161646/1‑54 (MQ=255)
                                                                                                               ggCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGgc                                                          <  1:1031189/118‑1 (MQ=255)
                                                                                                               ggCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGgc                                                          >  2:1031189/1‑118 (MQ=255)
                                                                                                                 ccTCTTCGCGGGTAAACCCGCTCCTACaggggattgcgtcgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgc                        >  2:622601‑M1/1‑27 (MQ=255)
                                                                                                                  ctctTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgcc                       >  1:554876‑M1/1‑26 (MQ=255)
                                                                                                                  ctctTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTa                       >  2:211979/1‑150 (MQ=255)
                                                                                                                   tctTCGCGGGTAAACCCGCTCCTACaggggattgcgccgttcgctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccc                      >  2:347982‑M1/1‑25 (MQ=255)
                                                                                                                    ctTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAgg                     <  1:364739/150‑1 (MQ=255)
                                                                                                                     ttCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctc                                                                    <  2:605340‑M1/102‑80 (MQ=255)
                                                                                                                     ttCGCGGGTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctc                                                                    >  1:605340‑M1/1‑23 (MQ=255)
                                                                                                                        gcgGGTTTACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtag                                                                                                                   <  1:212888‑M2/52‑5 (MQ=255)
                                                                                                                        gcgGGTTTACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtag                                                                                                                   >  2:212888‑M2/1‑48 (MQ=255)
                                                                                                                           ggTAAACCCGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattg              <  1:745919‑M1/150‑134 (MQ=255)
                                                                                                                            gTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCAc             >  2:81706/1‑150 (MQ=255)
                                                                                                                              aaaCCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaa                                                            <  1:580569‑M2/101‑60 (MQ=255)
                                                                                                                              aaaCCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaa                                                            >  2:580569‑M2/1‑42 (MQ=255)
                                                                                                                                aCCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGc         >  2:704310/1‑150 (MQ=255)
                                                                                                                                 cccGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatca                                                                        <  1:435901‑M1/86‑76 (MQ=255)
                                                                                                                                 cccGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatca                                                                        >  2:435901‑M1/1‑11 (MQ=255)
                                                                                                                                 cccGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattggacagg        <  2:1000209‑M2/150‑112 (MQ=255)
                                                                                                                                  ccGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacacc                                <  2:834455‑M1/125‑116 (MQ=255)
                                                                                                                                  ccGCTCCTACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacacc                                >  1:834455‑M1/1‑10 (MQ=255)
                                                                                                                                  ccGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattggacaggt       <  2:276363‑M2/150‑113 (MQ=255)
                                                                                                                                  ccGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattggacaggt       <  1:536209‑M2/150‑113 (MQ=255)
                                                                                                                                  ccGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGATAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCtt       >  1:1056412/1‑150 (MQ=255)
                                                                                                                                  ccGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACTGTAGGCGCTTCACCCGCtt       >  2:712146/1‑150 (MQ=255)
                                                                                                                                   cGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattggacaggtt      <  1:635280‑M2/150‑114 (MQ=255)
                                                                                                                                      tCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattggacaggttcag   <  2:103721‑M2/150‑117 (MQ=255)
                                                                                                                                      tCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTa                                 >  2:597900/1‑120 (MQ=255)
                                                                                                                                      tCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTa                                 <  1:597900/120‑1 (MQ=255)
                                                                                                                                      tCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTg   >  1:402802/1‑150 (MQ=255)
                                                                                                                                       ccTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGc  <  1:211979/150‑1 (MQ=255)
                                                                                                                                        cTACaggggattgcgccgttccctcggcctgcgtaggagcgggtaaacccgc                                                                                                   >  2:212888‑M1/1‑4 (MQ=255)
                                                                                                                                        cTACaggggattgcgccgttccctcggcctgcgtaggagcgggtaaacccgc                                                                                                   <  1:212888‑M1/52‑49 (MQ=255)
                                                                                                                                        cTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGca                            <  1:343313/123‑1 (MQ=255)
                                                                                                                                        cTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGca                            >  2:343313/1‑123 (MQ=255)
                                                                                                                                         tACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattgga            <  1:916246‑M1/138‑136 (MQ=255)
                                                                                                                                         tACaggggattgcgccgttccctcggcctgcgtaggagcgggtttacccgcgaagaggcccgcacaggcaacacatcagctcccggcaaacccgttctgccgccacgcctcatacaccgtcaccgccaccgtattgga            >  2:916246‑M1/1‑3 (MQ=255)
                                                                                                                                           |                                                                                                                                                 
CCGATGCGGCCGGGGTGCCGTAGCCTGAACCTGTCCAATACGGTGGCGGTGACGGTGTATGAGGCGTGGCGGCAGAACGGGTTTGCCGGGAGCTGATGTGTTGCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACGCAGGCCGAGGGAACGGCGCAATCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGC  >  NC_002947/5759352‑5759636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.