| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4957609 = | 0 (0.000) | 149 (1.530) | 73/256 | 0.3 | 100% | intergenic (‑47/+116) | fliH/fliG | flagellar assembly protein FliH/flagellar motor switch protein |
| ? | NC_002947 | 5222979 = | NA (NA) | intergenic (‑342/+37) | PP_4602/PP_4603 | AraC family transcriptional regulator/transposase | |||||
Only 100 of 284 total aligned reads displayed.
CGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGA > NC_002947/4957460‑4957756 | ggcttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgag > 1:987951‑M1/150‑150 (MQ=255)ggcttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgag < 2:1656369‑M1/1‑1 (MQ=255) gggCTCCGGTTCCGCATCGAAGGTTGGCAGCGTCCACACATCTCCGCCCTCGAGGTCGCGGGCACGGCTCAGGTCGCTGGGGTGGTGTTCTATGGTGGGCATGCTGTCATGTTCTCAAACCATGTTGGACCGACACGGTCCCTTGTAGGA < 2:894013‑M2/150‑1 (MQ=255) gcttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga > 2:2124299‑M1/149‑150 (MQ=255) cttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgagag > 1:767304‑M1/148‑150 (MQ=255) tCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatc > 2:353332‑M2/1‑147 (MQ=255) atgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCgg > 1:657674‑M1/145‑150 (MQ=255) gttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGt > 1:747894‑M1/143‑150 (MQ=255) gttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGt > 1:1953121‑M1/143‑150 (MQ=255) gttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGt > 2:1591745‑M1/143‑150 (MQ=255) ttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCgg < 1:311136‑M1/6‑1 (MQ=255) ttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCgg > 2:311136‑M1/142‑147 (MQ=255) ttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGtt > 1:1370485‑M1/142‑150 (MQ=255) ggTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacc > 2:528138‑M2/1‑144 (MQ=255) gaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcatagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCa < 1:2457926‑M1/11‑1 (MQ=255) aggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgag > 2:2534268‑M1/135‑135 (MQ=255) gaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCg < 2:1497935‑M1/23‑1 (MQ=255) aggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGt > 1:893276‑M1/127‑150 (MQ=255) gttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAAt > 1:1615878‑M1/123‑142 (MQ=255) gCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgt < 1:930173‑M2/150‑29 (MQ=255) ggaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttggtgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAAcc < 2:1739196‑M1/38‑1 (MQ=255) agaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCggg < 2:2199812‑M1/7‑1 (MQ=255) agaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCggg > 1:2199812‑M1/113‑119 (MQ=255) agaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAAcc < 2:827274‑M1/38‑1 (MQ=255) gaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCt > 1:592796‑M1/112‑150 (MQ=255) aagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTc < 1:1322910‑M1/40‑1 (MQ=255) ccACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaac > 2:783375‑M2/1‑110 (MQ=255) cACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaaca < 2:1620952‑M2/150‑42 (MQ=255) aCGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacat > 1:188766‑M2/1‑108 (MQ=255) ggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGa > 1:2311482‑M1/96‑150 (MQ=255) cgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGcc < 2:960798‑M1/59‑1 (MQ=255) cgggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCgg < 2:1175310‑M1/6‑1 (MQ=255) gggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGTGACAACCTCGATTGCCAGGACCGACGCCt < 2:270380‑M1/60‑1 (MQ=255) gggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCggg < 1:549692‑M1/7‑1 (MQ=255) gggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGAtt > 2:234277‑M1/91‑134 (MQ=255) gggctttgcgaagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGAtt < 1:234277‑M1/44‑1 (MQ=255) cgGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttc > 2:197017‑M2/1‑93 (MQ=255) gctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTc < 1:1649993‑M1/62‑1 (MQ=255) tttgcttcgcaaagcccggaaactggggtaacaactggtggccgcttgagtgcttagaaaacaatgggttggattttgtttgatgaGAGGGGGTTTAGTCGCGAATGAGAGGGCAGCGACAACCCCGAAAGCCAGGACCGAAGCCTTcgc < 2:24491‑M1/64‑1 (MQ=255) aCGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttc < 2:141855‑M2/150‑63 (MQ=255) cttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga > 2:1031416‑M1/83‑84 (MQ=255) cttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga < 1:1031416‑M1/2‑1 (MQ=255) cccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga > 2:1121543‑M1/73‑74 (MQ=255) ccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaga < 1:1830085‑M1/2‑1 (MQ=255) cggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCgg < 1:2144705‑M1/6‑1 (MQ=255) gaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGt < 2:1698004‑M1/8‑1 (MQ=255) gggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAggc > 1:271512‑M1/62‑150 (MQ=255) gggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCAGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAggc > 1:1497935‑M1/62‑150 (MQ=255) gtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCgg < 1:901530‑M1/66‑1 (MQ=255) tatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAggcggc > 2:924288‑M1/59‑150 (MQ=255) caactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTcg > 1:473731‑M1/56‑118 (MQ=255) caactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTcg < 2:473731‑M1/63‑1 (MQ=255) ggCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggc > 1:2443003‑M2/1‑54 (MQ=255) gtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTAt > 2:423633‑M1/50‑150 (MQ=255) gtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGACAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTAt > 2:934126‑M1/50‑150 (MQ=255) tGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggtt < 2:741305‑M2/150‑101 (MQ=255) ggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATgg > 2:2212647‑M1/48‑150 (MQ=255) gCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCCTGTAGGAGatcacccagcccttcagggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttg > 1:1132959‑M2/1‑49 (MQ=255) tGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggc > 1:2038616‑M2/1‑47 (MQ=255) gcttgagtgcttagaaaacaatgggttgcattttgttttatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATc < 1:845479‑M1/107‑1 (MQ=255) ttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGc < 1:1253008‑M1/58‑1 (MQ=255) ttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGc > 2:1253008‑M1/42‑99 (MQ=255) tGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgct > 1:2235260‑M2/1‑42 (MQ=255) gagtgcttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGa < 2:2511348‑M1/111‑1 (MQ=255) tcAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggc > 2:1783560‑M2/1‑37 (MQ=255) tcAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggc < 1:1783560‑M2/150‑114 (MQ=255) ttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCt > 1:2251588‑M1/34‑72 (MQ=255) ttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCt > 1:8133‑M1/34‑93 (MQ=255) ttagaaaacaatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCt < 2:654815‑M1/117‑1 (MQ=255) ttagaaaacaatgggttgcattttgtttgatgaGAGCGGGATCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGCTCGCGAATACCt < 1:2159781‑M1/117‑1 (MQ=255) aaaCCATGTTCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggct < 1:967597‑M2/56‑22 (MQ=255) ttCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgcctt < 2:1509668‑M2/150‑124 (MQ=255) ttCGGCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgcctt > 2:1918214‑M2/1‑27 (MQ=255) aatgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCAtt < 1:251967‑M1/126‑1 (MQ=255) tgggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTc > 1:1739196‑M1/23‑150 (MQ=255) ggttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTa > 2:854999‑M1/21‑101 (MQ=255) gCCGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgc > 1:1509668‑M2/1‑23 (MQ=255) gttgcattttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATcgc > 1:1237700‑M1/20‑128 (MQ=255) ccGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggta < 1:2424376‑M2/131‑110 (MQ=255) ccGACACGGTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggta > 2:2424376‑M2/1‑22 (MQ=255) ttttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGcc < 1:1094733‑M1/137‑1 (MQ=255) ttttgtttgatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGcc < 1:865979‑M1/137‑1 (MQ=255) ggTCCCTTGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccgggagggccagccgccttttgctttgttag < 2:1167969‑M2/150‑136 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgttgccgaggcccagaggcaaggtggacggcttcagttccgaagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgt > 1:2469749‑M2/1‑8 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgt < 1:455994‑M2/150‑143 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgt > 2:577230‑M2/1‑8 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgt > 2:2067631‑M2/1‑8 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttag > 1:397124‑M2/1‑8 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcgg > 1:936004‑M2/1‑8 (MQ=255) tGTAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaa < 1:1622463‑M2/93‑86 (MQ=255) gatgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAAc < 2:1226843‑M1/72‑1 (MQ=255) tgaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTa < 1:1224476‑M1/119‑1 (MQ=255) tAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 2:2157768‑M2/1‑6 (MQ=255) tAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt < 1:1189326‑M2/150‑145 (MQ=255) tAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggtccgt < 2:598717‑M2/148‑143 (MQ=255) tAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttag > 2:1327235‑M2/1‑6 (MQ=255) tAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgcctttt > 1:263723‑M2/1‑6 (MQ=255) gaGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGa > 2:2270586‑M1/3‑150 (MQ=255) aGGAGttcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtg < 1:1681261‑M2/150‑146 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagg < 1:100224‑M2/140‑137 (MQ=255) | CGGGCTCCGGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGATCAGGTCGCTGGGGTGGTGTTCTTTGGTGGGCATGCTGTCATGTTCTCAAACCATGTTCGGCCGACACGGTCCCTTGTAGGAGCGGGTTCACCCGCGAATGCGTCGGCAGCGACAACCTCGATTGCCAGGACCGACGCCTTCGCGGGTAAACCCGCTCCTACAAAAGGCGGCGTCGGCTATGGGATCGCGAATACCTTAGATCATTTCCTCGGCGCCCTTGCCGCCGA > NC_002947/4957460‑4957756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |