| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 1,842,677 | Δ53 bp | coding (2107‑2159/2754 nt) | gacS ← | sensor protein GacS |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 1842677 | 1842729 | 53 | 93 [0] | [0] 93 | gacS | sensor protein GacS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1842676 | 0 (0.000) | 93 (0.940) | 67/260 | 0.5 | 100% | coding (2160/2754 nt) | gacS | sensor protein GacS |
| ? | NC_002947 | 1842730 = | 0 (0.000) | coding (2106/2754 nt) | gacS | sensor protein GacS | |||||
CATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAG > NC_002947/1842535‑1842823 | cATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataac < 2:1985038‑M1/150‑9 (MQ=255) cGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattg < 2:1701187‑M1/150‑14 (MQ=255) cTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgtt < 1:2399871‑M1/150‑16 (MQ=255) cTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgtt < 1:281854‑M1/150‑16 (MQ=255) aacaacGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggc > 1:2409044‑M1/1‑129 (MQ=255) aacaacGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggc < 2:803466‑M1/150‑22 (MQ=255) aacGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGATCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccag < 2:1780935‑M1/150‑25 (MQ=255) gcgcgTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtac > 1:364090‑M1/1‑123 (MQ=255) cgTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctc < 2:2255828‑M1/150‑31 (MQ=255) gtatatcgttgGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcg > 2:503841‑M1/6‑119 (MQ=255) gTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcg < 2:2076142‑M1/150‑32 (MQ=255) tttCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggca < 1:172709‑M1/150‑35 (MQ=255) atggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCctcataaccattgttgacggccagtacctcggcacccaggtcttc < 2:383818‑M1/150‑46 (MQ=255) atggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccag < 2:2441322‑M1/144‑40 (MQ=255) atggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccag > 1:2441322‑M1/1‑105 (MQ=255) tggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc > 1:1958153‑M1/1‑104 (MQ=255) tggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc < 2:1958153‑M1/149‑46 (MQ=255) ggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcga < 1:503841‑M1/150‑48 (MQ=255) ggcatggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcga < 1:1742470‑M1/150‑48 (MQ=255) atggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctc < 1:765384‑M1/130‑31 (MQ=255) atggGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctc > 2:765384‑M1/1‑100 (MQ=255) gggCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagg < 2:953825‑M1/150‑53 (MQ=255) gggCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagg < 1:1414111‑M1/150‑53 (MQ=255) gCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGTGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc > 2:2531246‑M1/1‑96 (MQ=255) gCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGTGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc < 1:2531246‑M1/141‑46 (MQ=255) tGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcg < 2:181515‑M1/123‑32 (MQ=255) tGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCGGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcg > 1:181515‑M1/1‑92 (MQ=255) gacgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagca < 2:2146217‑M1/150‑66 (MQ=255) gacgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagca < 1:1515577‑M1/150‑66 (MQ=255) acgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcag < 1:911635‑M1/150‑67 (MQ=255) cgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattg < 2:2040880‑M1/96‑14 (MQ=255) cgaTCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattg > 1:2040880‑M1/1‑83 (MQ=255) tCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcagg > 1:897638‑M1/1‑80 (MQ=255) gCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagt < 1:472052‑M1/102‑26 (MQ=255) gCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagt > 2:472052‑M1/1‑77 (MQ=255) gCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgtt > 1:1369404‑M1/1‑77 (MQ=255) gCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgtt < 2:1369404‑M1/92‑16 (MQ=255) gTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcat > 1:1305528‑M1/1‑70 (MQ=255) gCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgt < 2:81880‑M1/150‑84 (MQ=255) ccGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCTGCTGTCCATTCCGGGCATCcgcataaccactgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtc < 1:2439141‑M1/150‑85 (MQ=255) ccGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtc > 2:2363520‑M1/1‑66 (MQ=255) gCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggttttcaccagcagcaggttggcggcattgtcgt > 2:1485694‑M1/1‑64 (MQ=255) gCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtt < 1:708239‑M1/119‑56 (MQ=255) gCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtt > 2:708239‑M1/1‑64 (MQ=255) tGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgac < 2:2161736‑M1/150‑91 (MQ=255) gtTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagc < 2:1351583‑M1/119‑65 (MQ=255) gtTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagc > 1:1351583‑M1/1‑55 (MQ=255) ttCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagag < 1:2363520‑M1/150‑97 (MQ=255) tcCCACAGGCGTATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagaggat > 2:35841‑M1/1‑51 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggc < 2:1323305‑M1/126‑76 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggc > 1:1323305‑M1/1‑51 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtct > 2:2504808‑M1/1‑51 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtct < 1:2504808‑M1/94‑44 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgac > 1:1573412‑M1/1‑51 (MQ=255) tcCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgac < 2:1573412‑M1/69‑19 (MQ=255) cccACAGGCGGATGTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtatt < 1:520384‑M1/150‑101 (MQ=255) ccACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattt > 2:49132‑M1/1‑49 (MQ=255) ccACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattt > 2:1735016‑M1/1‑49 (MQ=255) cacaGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtatttt < 2:364090‑M1/150‑103 (MQ=255) acaGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttt > 1:2234847‑M1/1‑47 (MQ=255) caGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcg < 2:1305528‑M1/150‑105 (MQ=255) aGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcgg > 1:1261784‑M1/1‑45 (MQ=255) aGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcgg > 2:2134251‑M1/1‑45 (MQ=255) gCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtc > 2:2527988‑M1/1‑43 (MQ=255) gCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagt > 2:2086727‑M1/1‑43 (MQ=255) gCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccatggttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagt < 1:2086727‑M1/140‑98 (MQ=255) gCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCc > 2:1152479‑M1/1‑43 (MQ=255) gCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCc < 1:1152479‑M1/44‑2 (MQ=255) ggATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc < 2:62757‑M1/86‑46 (MQ=255) ggATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttc > 1:62757‑M1/1‑41 (MQ=255) gATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtc < 2:897638‑M1/150‑111 (MQ=255) tCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgc > 1:721196‑M1/1‑38 (MQ=255) tGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctg < 1:2400520‑M1/150‑115 (MQ=255) tGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctg > 1:2528565‑M1/1‑36 (MQ=255) tGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctg > 1:334856‑M1/1‑36 (MQ=255) gTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctgg > 1:2252783‑M1/1‑35 (MQ=255) ttCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttgg < 2:1392878‑M1/108‑75 (MQ=255) ttCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttgg > 1:1392878‑M1/1‑34 (MQ=255) ttCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttga < 2:2512879‑M1/51‑18 (MQ=255) ttCGGTACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttga > 1:2512879‑M1/1‑34 (MQ=255) tACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcga < 2:1269614‑M1/76‑48 (MQ=255) tACAGGCGCGGCCGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcga > 1:1269614‑M1/1‑29 (MQ=255) ccGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggc > 2:1232306‑M1/1‑18 (MQ=255) ccGTCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggc < 1:1232306‑M1/93‑76 (MQ=255) tCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagc < 1:2193791‑M1/82‑68 (MQ=255) tCCATGCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagc > 2:2193791‑M1/1‑15 (MQ=255) gCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctgg < 1:713002‑M1/125‑116 (MQ=255) gCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctgg > 2:713002‑M1/1‑10 (MQ=255) gCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttc < 2:2483375‑M1/113‑104 (MQ=255) gCCGGGCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttc > 1:2483375‑M1/1‑10 (MQ=255) gggCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttacc > 1:2091381‑M1/1‑7 (MQ=255) gggCATCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttacc < 2:2091381‑M1/68‑62 (MQ=255) aTCcgcataaccattgttgacggccagtacctcggcacccaggtcttcgagcagggtttttaccagcagcaggttggcggcattgtcgtcgacgcagagtattttcggtcgtcgctggccgttggggttgctcccctcggccagcggacg < 2:2252783‑M1/150‑148 (MQ=255) | CATGCCGCTGTGCAACAACGCGCGTTTTTCGTTGGCCATGGCATGGGCAGTGAGGGCGACGATCGGCAGCGGGTTGCCGCTCTGGGTGTTCTCCCACAGGCGGATCTGTTCGGTACAGGCGCGGCCGTCCATGCCGGGCATCTGCACATCCATCAGCACCAGGTCGAACAATTCTTCCTGCACGGCCTGTACCGCCGCATAACCATTGTTGACGGCCAGTACCTCGGCACCCAGGTCTTCGAGCAGGGTTTTTACCAGCAGCAGGTTGGCGGCATTGTCGTCGACGCAG > NC_002947/1842535‑1842823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |