Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 1,443,578 G→T F205L (TTC→TTA)  PP_1262 ← LysR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,443,5780GT100.0% 302.5 / NA 90F205L (TTC→TTA) PP_1262LysR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (42/48);  total (42/48)

CCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCGAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGCCCAGGCGCT  >  NC_002947/1443432‑1443723
                                                                                                                                                  |                                                                                                                                                 
ccGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAAc                                                                                                                                                >  2:1449027/1‑150 (MQ=255)
ccGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAAc                                                                                                                                                >  1:231678/1‑150 (MQ=255)
 cGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACa                                                                                                                                               >  2:1128258/1‑150 (MQ=255)
  gTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTTACCATCTCTTGGCCTTCCTGCCCATCTAACAg                                                                                                                                              >  1:1787493/1‑150 (MQ=255)
  gTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAg                                                                                                                                              >  1:2293524/1‑150 (MQ=255)
   tCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGc                                                                                                                                             >  2:1794153/1‑150 (MQ=255)
   tCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGc                                                                                                                                             <  2:2304666/150‑1 (MQ=255)
      cGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCAc                                                                                                                                          <  1:2518704/150‑1 (MQ=255)
      cGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCAc                                                                                                                                          <  2:696428/150‑1 (MQ=255)
       gCAGGCCCTCGATAGGCGAATAGATCGGCAGCACGCCGACGCCCATGCCACTGGGGATCGCAGTCTGCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCGTGTCTTGGACTTCCGGACCGTCTAAAACCCACt                                                                                                                                         >  2:28303/1‑150 (MQ=255)
           gCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTtctc                                                                                                                                     <  2:861391/150‑1 (MQ=255)
               tCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGc                                                                                                                                 <  2:2473176/150‑1 (MQ=255)
                  aTAGCCGACTAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTtctc                                                                                                                                     <  2:1770613/143‑1 (MQ=255)
                  aTAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTtctc                                                                                                                                     >  1:1770613/1‑143 (MQ=255)
                   tAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCGATCTAACAGCCACTTCTCGAGGGGTa                                                                                                                             >  2:1224623/1‑150 (MQ=255)
                             gATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCt                                                                                                                   <  2:2293524/150‑1 (MQ=255)
                              aTCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGc                                                                                                                                             <  2:2483802/123‑1 (MQ=255)
                              aTCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGc                                                                                                                                             >  1:2483802/1‑123 (MQ=255)
                               tCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAAc                                                                                                                                                <  2:1008752/119‑1 (MQ=255)
                               tCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAAc                                                                                                                                                >  1:1008752/1‑119 (MQ=255)
                               tCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGa                                                                                                                 >  2:1109596/1‑150 (MQ=255)
                               tCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGa                                                                                                                 <  1:42384/150‑1 (MQ=255)
                                   cagcaCGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCAt                                                                                                             <  1:1109596/150‑1 (MQ=255)
                                       aCGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCt                                                                                                                   >  2:1150500/1‑140 (MQ=255)
                                       aCGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCt                                                                                                                   <  1:1150500/140‑1 (MQ=255)
                                          ccTACGCCCATGCCCCTGCGGATCGCAGTCTTCATGGCATCCGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCgcagg                                                                                                      <  1:1434460/150‑1 (MQ=255)
                                          ccTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCgcagg                                                                                                      <  1:1128258/150‑1 (MQ=255)
                                           cTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCgcaggc                                                                                                     <  2:1104809/150‑1 (MQ=255)
                                            tACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCgcaggca                                                                                                    >  1:2120822/1‑150 (MQ=255)
                                                 ccATGCCTCAGTGGATCGCAGTCTTCATGGCATCGGCTGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGt                                                                                               <  1:1377939/150‑1 (MQ=255)
                                                   aTGTCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACa                                                                                                                                               >  2:1766360/1‑100 (MQ=255)
                                                   aTGTCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACa                                                                                                                                               <  1:1766360/100‑1 (MQ=255)
                                                     gCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCtt                                                                                           >  1:2399462/1‑150 (MQ=255)
                                                       cACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGa                                                                                         >  1:2180220/1‑150 (MQ=255)
                                                       cACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGa                                                                                         <  2:2120822/150‑1 (MQ=255)
                                                          tGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCa                                                                                      <  1:2318796/150‑1 (MQ=255)
                                                           gCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAg                                                                                     >  1:113057/1‑150 (MQ=255)
                                                             ggATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGt                                                                                   <  2:809968/150‑1 (MQ=255)
                                                               tccGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCg                                                                                 >  2:537677/3‑150 (MQ=255)
                                                               aTCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGa                                                                                                                 >  2:1723717/1‑118 (MQ=255)
                                                               aTCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGa                                                                                                                 <  1:1723717/118‑1 (MQ=255)
                                                                   cAGTATTCATGGCATCTGCGGTGTGCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAg                                                                             >  2:937121/1‑150 (MQ=255)
                                                                    aGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAgg                                                                            >  1:2255487/1‑150 (MQ=255)
                                                                    aGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAgg                                                                            >  1:2450831/1‑150 (MQ=255)
                                                                     gTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGc                                                                           <  2:31994/150‑1 (MQ=255)
                                                                       cTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCtt                                                                         <  2:522111/150‑1 (MQ=255)
                                                                         ccATGACCTCGGAGGCGTTCACAATGAACGGAGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTtgt                                                                       <  2:2450831/149‑1 (MQ=255)
                                                                          cATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTtgtg                                                                      <  2:492160/150‑1 (MQ=255)
                                                                           aTGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTgc                                                                     <  1:537677/150‑1 (MQ=255)
                                                                              gCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACCGCCACTTATCCAGCGGTATCACCGGGCTGCCCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGcgcc                                                                  <  1:1224623/150‑1 (MQ=255)
                                                                                aTCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGcgccac                                                                <  2:231678/150‑1 (MQ=255)
                                                                                         gtTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTg                                                       >  2:2411449/1‑150 (MQ=255)
                                                                                           tCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTggg                                                     >  1:140734/1‑150 (MQ=255)
                                                                                            cACCATGCACGGCGTTCTTGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACACAAGCGGCGGGATCCTCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGc                                                    <  1:1449027/150‑1 (MQ=255)
                                                                                            cACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCgg                                                                                                                      >  1:2485255/1‑84 (MQ=255)
                                                                                            cACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCgg                                                                                                                      <  2:2485255/84‑1 (MQ=255)
                                                                                             aCCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCa                                                                                                                                           <  2:1095956/62‑1 (MQ=255)
                                                                                             aCCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCa                                                                                                                                           >  1:1095956/1‑62 (MQ=255)
                                                                                             aCCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCg                                                   >  2:1250346/1‑150 (MQ=255)
                                                                                              ccATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGa                                                  <  1:28303/150‑1 (MQ=255)
                                                                                               cATGTACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGAt                                                 <  1:540465/150‑1 (MQ=255)
                                                                                               cATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGTCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGAt                                                 >  1:600653/1‑150 (MQ=255)
                                                                                               cATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGAt                                                 >  2:1533005/1‑150 (MQ=255)
                                                                                                   aaCGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAg                                             <  1:937121/150‑1 (MQ=255)
                                                                                                      ggCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTgg                                                      <  2:760313/138‑1 (MQ=255)
                                                                                                      ggCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTgg                                                      >  1:760313/1‑138 (MQ=255)
                                                                                                         gAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAggcgggc                                       >  1:1355868/1‑150 (MQ=255)
                                                                                                            cTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGCGCGATGTAGGCGGGCGAg                                    <  1:2111133/150‑1 (MQ=255)
                                                                                                            cTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAAGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCTCCACGCCATGCTGGGCGATGTAGGCGGGCGAg                                    <  1:1794153/150‑1 (MQ=255)
                                                                                                             tGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAgg                                   <  2:2180220/150‑1 (MQ=255)
                                                                                                                 gATGTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGcaca                               <  1:1533005/150‑1 (MQ=255)
                                                                                                                    gTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAg                                                                                     >  1:1333440/1‑93 (MQ=255)
                                                                                                                    gTTGACCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAg                                                                                     <  2:1333440/93‑1 (MQ=255)
                                                                                                                        aCCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATg                        >  2:1428228/1‑150 (MQ=255)
                                                                                                                        aCCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATg                        >  1:1176716/1‑150 (MQ=255)
                                                                                                                        aCCATCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATg                        >  2:153749/1‑150 (MQ=255)
                                                                                                                           aTCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGAc                                                                                                                <  2:69558/59‑1 (MQ=255)
                                                                                                                           aTCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGAc                                                                                                                >  1:69558/1‑59 (MQ=255)
                                                                                                                           aTCTCTTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTg                     <  1:2079399/150‑1 (MQ=255)
                                                                                                                             ctctTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTa                   <  1:1428228/150‑1 (MQ=255)
                                                                                                                             ctctTGGCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTa                   <  1:2411449/150‑1 (MQ=255)
                                                                                                                                   gCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAg                                                                                     >  2:1752068/1‑78 (MQ=255)
                                                                                                                                   gCCTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAg                                                                                     <  1:1752068/78‑1 (MQ=255)
                                                                                                                                     cTTCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGc           >  2:324725/1‑150 (MQ=255)
                                                                                                                                      ttCCGGGGCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGcc          >  2:2004588/1‑150 (MQ=255)
                                                                                                                                      ttCCGGGCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGcc          >  2:1408820/1‑150 (MQ=255)
                                                                                                                                          gggCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAg                                    >  2:328341/1‑120 (MQ=255)
                                                                                                                                          gggCCATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAg                                    <  1:328341/120‑1 (MQ=255)
                                                                                                                                              cATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGCCCAGGCGCt  <  2:1602437/150‑1 (MQ=255)
                                                                                                                                              cATCTAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGCCCAGGCGCt  <  2:113057/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
CCGTCCCGCAGGCCCTCGATAGCCGAATAGATCGGCAGCACGCCTACGCCCATGCCACTGCGGATCGCAGTCTTCATGGCATCGGCGGTGTTCACCATGAACGGCGAACTGGTGATGTTGACCATCTCTTGGCCTTCCGGGCCATCGAACAGCCACTTCTCCAGCGGTATCACCGGGCTGACCATGCGCAGGCAGGCGTGCTTGAGCAGGTCGGCAGGCTTGTGCGCCACGCCATGCTGGGCGATGTAGGCGGGCGAGGCACAGACAATGCTGTAGGTGATGCCCAGGCGCT  >  NC_002947/1443432‑1443723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑