| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 173080 = | NA (NA) | 4 (0.140) | 4/234 | NT | NA | intergenic (+170/‑123) | PP_16SA/PP_23SA | 16S ribosomal RNA/23S ribosomal RNA |
| ? | NC_002947 | 173100 = | NA (NA) | intergenic (+190/‑103) | PP_16SA/PP_23SA | 16S ribosomal RNA/23S ribosomal RNA | |||||
GGCATCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/173234‑173080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggtgGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCAGAGG > NC_002947/173100‑173248 GGCATCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAAC < 1:312716/150‑1GGCATCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAAC < 2:366475/150‑1 ATCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGG > 1:449855/1‑150 TCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT > 2:258673/1‑150 TCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT < 2:788477/150‑1 TCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT < 2:59331/150‑1 TCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT > 1:608008/1‑150 CCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTG < 2:449855/150‑1 CTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT < 1:615204/129‑1 CTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGT > 2:615204/1‑129 TTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGAGATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTG > 1:598354/1‑126 TTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGAGATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTG < 2:598354/126‑1 CATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTG < 1:194382/124‑1 CATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTG > 2:194382/1‑124 ACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGGATCAGGCTAAGGTAAAATTTGT > 1:769363/1‑66 ACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTGGATCAGGCTAAGGTAAAATTTGT < 2:769363/66‑1 CCTGATCCACCAGCAGTGAAACTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTAC < 2:28731/76‑1 CCTGATCCACCAGCAGTGAAACTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTAC > 1:28731/1‑76 cCTGGTATATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGT < 1:383924/149‑1 CTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTC < 1:678140/150‑1 CTGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTC < 2:680862/150‑1 TGGTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCACCGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCA < 2:534490/150‑1 GTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACG < 1:507711/129‑1 GTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACG > 2:507711/1‑129 GTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAG > 2:779803/1‑80 GTGGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAG < 1:779803/80‑1 GGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGTATGCCTTGTCAGTCAGAGG < 2:446501/150‑1 GGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCAGAGG < 1:112374/150‑1 GGCATCCACCGTATGCGCTTCTTCACTTGACCATATAACCCCAAGCAATCTGGTTATACTGTGAAGACGACATTCGCCGAAAATTCGTACGTTGCTCTTTCGAGCAGAACTCACAAATTTTACCTTAGCCTGATCCACCAGCAGTGAAACTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/173234‑173080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggtgGATCAGGCTAAGGTAAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCATACGGTGGATGCCTTGGCAGTCAGAGG > NC_002947/173100‑173248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |