New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 427965 | 39 (1.320) | 5 (0.170) | 4/242 | NT | 11.4% | intergenic (‑164/+88) | PP_0350/PP_0351 | ferrichrome‑iron receptor/transmembrane sensor |
? | NC_002947 | = 428006 | 39 (1.340) | intergenic (‑205/+47) | PP_0350/PP_0351 | ferrichrome‑iron receptor/transmembrane sensor |
GACGGGTAAGTGCTTGCTGCTTCCTTGCCGAGCGAGATCTGAAAAGTGACAGGGTGAATCTGAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/427815‑427965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTGGACACACATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTGCTGGCAAAATCCCATTAAATAATT < NC_002947/428006‑427889 GACGGGTAAGTGCTTGCTGCTTCCTTGCCGAGCGAGATCTGAAAAGTGACAGGGTGAATCTGAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTC > 2:519259/1‑150 AAGTGACAGGGTAAATCTAAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTGTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCGGGGTGGTG < 2:149195/150‑1 AGGGTGAATCTGAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTG > 1:628313/1‑143 AGGGTGAATCTGAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTG < 2:628313/143‑1 TTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCGCCACCGTATTAGCGGGTAAACCCGCTCCTACCACGGTGGTGGA < 2:400851/126‑1 TTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCGCCACCGTATTAGCGGGTAAACCCGCTCCCACCACGGTGGTGGA > 1:400851/1‑126 CGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTGGACACACATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTGCTGGCAAAATCCCATTAAATAATT < 1:192108/119‑1 CGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTGGACACACATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTGCTGGCAAAATCCCATTAAATAATT > 2:192108/1‑119 GACGGGTAAGTGCTTGCTGCTTCCTTGCCGAGCGAGATCTGAAAAGTGACAGGGTGAATCTGAAAAATATTGAGAATTATTTAATGGGATTTTGCCAGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/427815‑427965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGTGGTGGACACACATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGTGCTGGCAAAATCCCATTAAATAATT < NC_002947/428006‑427889 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |