| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 614300 | 28 (0.950) | 7 (0.320) | 5/184 | NT | 21.9% | intergenic (‑116/+62) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase |
| ? | NC_002947 | = 614316 | 29 (1.320) | intergenic (‑132/+46) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase | |||||
AACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/614135‑614300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtaggatcgggtttacccgcgaatgcgATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCACGACGTTT < NC_002947/614316‑614170 AACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGG > 1:451071/1‑150 GGATCTCTTGAAACGTCGTGGGCATCAGGCGACTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACGCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGGTCTTGAAT > 1:185341/1‑150 TGGGCATCAGGCTAGTCGTTATAGGTGTGTGAAGACGCGGCAGGTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGG < 2:185341/150‑1 TGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGG < 2:46334/150‑1 CCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGG < 2:713103/102‑1 CCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGG > 1:713103/1‑102 CCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGC > 2:736706/1‑73 CCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGC < 1:736706/73‑1 TGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAAC < 1:739364/150‑1 GATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTC > 2:451071/1‑150 TCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCATAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGC > 1:185300/1‑150 CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCA > 2:498684/1‑150 CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCA > 2:563296/1‑150 CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCA > 1:312205/1‑150 CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGAT > 1:542125/1‑145 CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGAT < 2:542125/145‑1 CGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCATAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCAC < 2:185300/150‑1 GCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCACGACGTTT < 1:707565/150‑1 AACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/614135‑614300‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtaggatcgggtttacccgcgaatgcgATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCACGACGTTT < NC_002947/614316‑614170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |