| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 867938 = | 54 (1.830) | 7 (0.270) | 7/216 | NT | 13.7% | intergenic (+33/+144) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| ? | NC_002947 | 867998 = | 41 (1.580) | intergenic (+93/+84) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase | |||||
CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/868097‑867938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCA > NC_002947/867998‑868145 CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGT > 1:633281/1‑150 AGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGG < 1:180826/150‑1 TACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCG > 1:668217/1‑150 ACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG < 2:9700/150‑1 ACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG < 2:267028/150‑1 CGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGGGCGGG > 2:766383/1‑150 GCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC > 2:516143/1‑150 GCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGT > 1:567591/1‑85 GCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGT < 2:567591/85‑1 CGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG > 1:564416/1‑76 CGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGG < 2:564416/76‑1 GCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGG > 2:93766/1‑56 GCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGG < 1:93766/56‑1 GCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAG > 2:459805/1‑150 TCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCGAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTG > 2:332157/1‑150 CCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCT > 1:325283/1‑150 ACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTG < 1:86503/150‑1 GTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAG > 2:267026/1‑86 GTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAG < 1:267026/86‑1 TAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCGAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGC < 1:332157/150‑1 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGC < 1:621338/146‑1 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGC > 2:621338/1‑146 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTT < 1:758760/89‑1 CTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTT > 2:758760/1‑89 TGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCG < 2:538362/150‑1 AGCGGGCATGCCCGCGAAGAGGGCGGTCCAGACTGATCAGTCCCGAGGCACAAAAAACGCCCCGAGGGGCGTTGTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGTCAGGTCCAGGGCCGCGTCGTTAT < 1:376446/150‑1 AGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAT > 2:213862/1‑150 GCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCA < 2:530393/150‑1 CAAGCACTACGCTTAAGCCGGTCTGAAACGCAAAAACGCCCCTCGGGGCGTTTTTTGTGCCTGGCGCTTGATCAGCCTGTACCGCCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCGGTAATGCCCGCAGGTGCGGCGCGACTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/868097‑867938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCA > NC_002947/867998‑868145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |