| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 948150 | 34 (1.150) | 4 (0.140) | 3/234 | NT | 10.9% | coding (624/1179 nt) | hmp | flavohemoprotein |
| ? | NC_002947 | = 948173 | 33 (1.170) | coding (647/1179 nt) | hmp | flavohemoprotein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCAAGGCAGAACCTGGCCAGTACATCGGTCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/948077‑948150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattccTTGCCGTCGCACAGCGCCGACAGGGAATAGTTGCGGCGCTGCTCGGCACCGTCAATGTCCAGTTTCAGACCGATGTACTGGCCAGGTTCTGCCTTGAGCACCGGCATGCCATCCACCGGGGCGAAGTAGAACGAAACGATCTCGC < NC_002947/948173‑948029 TCAAGGCAGAACCTGGCCAGTACATCGGTCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCCTTGCCGTCGCACAGCGCCGACAGGGAATA < 1:631805/103‑1TCAAGGCAGAACCTGGCCAGTACATCGGTCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCCTTGCCGTCGCACAGCGCCGACAGGGAATA > 2:631805/1‑103 TCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCCTTGCCGTCGCACAGCGCCGACAGGGAATA < 1:194206/75‑1 TCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCCTTGCCGTCGCACAGCGCCGACAGGGAATA > 2:194206/1‑75 ATTCCTTGCCGTCGCACAGCGCCGACAGGGAATAGTTGCGGCGCTGCTCGGCACCGTCAATGTCCAGTTTCAGACCGATGTACTGGCCAGGTTCTGCCTTGAGCACCGGCATGCCATCCACCGGGGCGAAGTAGAACGAAACGATCTCGC < 1:335529/150‑1 CTTGCCGTCGCACAGCGCCGACAGGGAATAGTTGCGGCGCT > 1:517415/1‑41 CTTGCCGTCGCACAGCGCCGACAGGGAATAGTTGCGGCGCT < 2:517415/41‑1 TCAAGGCAGAACCTGGCCAGTACATCGGTCTGAAACTGGACATTGACGGTGCCGAGCAGCGCCGCAACTATTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/948077‑948150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattccTTGCCGTCGCACAGCGCCGACAGGGAATAGTTGCGGCGCTGCTCGGCACCGTCAATGTCCAGTTTCAGACCGATGTACTGGCCAGGTTCTGCCTTGAGCACCGGCATGCCATCCACCGGGGCGAAGTAGAACGAAACGATCTCGC < NC_002947/948173‑948029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |