| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1025270 = | 44 (1.490) | 6 (0.260) | 5/192 | NT | 15.9% | intergenic (‑121/+108) | opdP/dppA‑II | glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein |
| ? | NC_002947 | 1025363 = | 29 (1.260) | intergenic (‑214/+15) | opdP/dppA‑II | glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein | |||||
GGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1025441‑1025270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCT > NC_002947/1025363‑1025511 GGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAG > 1:465714/1‑150 TTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGG < 2:92032/150‑1 TCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGG < 2:350137/150‑1 CCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGG < 2:354381/141‑1 CCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGG > 1:354381/1‑141 CCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGACATCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCT > 2:662881/1‑150 CCAGTGCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGGGCGGGCT > 2:397061/1‑150 TTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCC > 1:751082/1‑150 GTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAA > 1:495929/1‑150 AGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAG < 2:495929/150‑1 GCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGG < 2:508087/150‑1 TGTTGATTAAGCGTTAGCCATTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGG > 1:284618/1‑100 TGTTGATTAAGCGTTAGCCATTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGG < 2:284618/100‑1 CCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGA > 1:346274/1‑150 CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGG > 1:662016/1‑147 CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGG < 2:662016/147‑1 CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAA < 1:269492/97‑1 CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAA > 2:269492/1‑97 CACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGA < 2:346274/150‑1 GGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGG > 1:444110/1‑120 GGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGG < 2:444110/120‑1 ttcGCGGGCAAGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTA > 2:433984/4‑150 GCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCCCACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATC < 2:688667/150‑1 GCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTA < 2:458799/150‑1 GCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTA > 1:458799/1‑150 CTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTAC < 1:594258/150‑1 TTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACC > 2:423535/1‑150 CCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGACTGCGCCACCGGCGTAATCGGTACCTGCT > 1:129528/1‑150 CGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTG > 1:570877/1‑150 GAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTT < 2:550760/150‑1 GAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAG < 2:441185/150‑1 GGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCC < 1:574225/150‑1 GCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCG > 2:47706/1‑150 CGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCT > 2:256247/1‑150 GGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1025441‑1025270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCGCT > NC_002947/1025363‑1025511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |