New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1499443 =	27 (0.910)	5 (0.210)	4/200	NT	19.6%	intergenic (+13/‑153)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	1499526 =	19 (0.790)					intergenic (+96/‑70)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein

TCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1499609‑1499443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCC  >  NC_002947/1499526‑1499647                                                                                                                                                                                                                                                                                                   TCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCG                                                                                                                                             <  2:204851/150‑1  CTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG                                                                                                                                            <  2:297848/150‑1          GTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG                                                                                                                                            <  1:145115/142‑1          GTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG                                                                                                                                            >  2:145115/1‑142           TCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCG                                                                                                                                   >  2:682920/1‑150              TGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTC                                                                                                                                >  1:198786/1‑150                ATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGATCGGGCGTAACCGCGAAAAACAGCAAAAGCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCC                                                                                                                              >  1:776721/1‑150                                                                                                     CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTG                                                                     >  1:2151/1‑122                                                                                                     CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTG                                                                     <  2:2151/122‑1                                                                                                     CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGG                                                                                                       >  1:602839/1‑88                                                                                                     CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGG                                                                                                       <  2:602839/88‑1                                                                                                      CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCGCGCCCGCTCCCAAAGACTGGTTGCCATTAAGCGGGCCTATCGCTCCATTGACGGCACGTTTTTTGTTGCGTCGCTAACGAATCATGAATCCCTTAGA                                        >  2:788849/1‑150                                                                                                                                            CCTGTTTCGCGGGCACGCCCGCGGCCACAGACTGATTGCCATTAAGCGCGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCC  <  1:1900/150‑1                                                                                                                                                        GCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCC                                              <  1:596075/94‑1                                                                                                                                                        GCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCC                                              >  2:596075/1‑94                                                                                                                                                                                                                                                                                                   TCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1499609‑1499443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCC  >  NC_002947/1499526‑1499647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.