| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2086774 = | NA (NA) | 4 (0.140) | 4/230 | NT | NA | coding (846/1302 nt) | PP_1865 | transposase |
| ? | NC_002947 | 2086805 = | NA (NA) | coding (877/1302 nt) | PP_1865 | transposase | |||||
CTGTTCAACACTTCGCTTGAGCAAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086927‑2086774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcggTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGA > NC_002947/2086805‑2086950 CTGTTCAACACTTCGCTTGAGCAAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCA > 2:260487/1‑150CTGTTCAACACTTCGCTTGAGCAAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCA > 2:757962/1‑150 GTTCAACACTTCTCTTGAGCAAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGC < 1:547598/150‑1 AAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTGTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAA > 1:778491/1‑150 GTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAAC < 2:778491/150‑1 AACCGCTGGAACATCCCTTCAATGCTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTT > 1:176146/1‑89 AACCGCTGGAACATCCCTTCAATGCTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTT < 2:176146/89‑1 CCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCC > 1:694439/1‑150 CCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCC < 1:694888/150‑1 CCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCC > 2:118163/1‑150 GCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGA < 1:597705/150‑1 GCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGA > 2:676007/1‑150 GCGGTTGGAAGCAATTCGGGAAAGTGAAATTGAACCCCTCGGCACTCCGCGAGCCGCCTTGCTTGGATTCACCGCTGCCGTGCTAGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCCCGATGCCTTGCCCGA < 2:13096/150‑1 CGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTG < 1:550017/105‑1 CGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTG > 2:550017/1‑105 CTGTTCAACACTTCGCTTGAGCAAGGCCAGAACGTTGTATGCCAGCACGGCAGTGGTGAATCCAAGCAAGGCGGCTCGCGGACTGCCGAGGGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086927‑2086774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcggTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACGTTCTGGCCTTGCTCAAGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGA > NC_002947/2086805‑2086950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |