New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4873089 =	45 (1.520)	4 (0.140)	4/236	NT	9.0%	coding (576/693 nt)	aqpZ	aquaporin Z
	?	NC_002947	4873108 =	38 (1.340)					coding (557/693 nt)	aqpZ	aquaporin Z

GGCGATGTTCCTGGTGGTCATCATGGGGGCGACCGACGCCCGCGCACCGGCAGGTTTTGCACCCATCGCCATCGGCCTGGCCCTGACCCTGATCCACCTGATCTCGATCCCGGTGACCAATACCTCTGTCAACCCCGCGCGTA‑GCACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4873239‑4873089 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggTTGACAGAGGTATTGGTCACCGGGATCGAGATCAGGTGGATCAGGGTCAGG  >  NC_002947/4873108‑4873158                                                                                                                                                                                                             GGCGATGTTCCTGGTGGTCATCATGGGGGCGACCGACGCCCGCGCACCGGCAGGTTTTGCACCCATCGCCATCGGCCTGGCCCTGACCCTGATCCACCTGATCTCGATCCCGGTGACCAATACCTCTGTCAACCCCGCGCGTA‑GCACGGG                                                      <  2:23258/150‑1                                                                    GCCATCGGCCTGGCCCTGACCCTGATCCACCTGATCTCGATCCCGGTGACCAATACCTCTGTCAACCCCGTGC‑TACGCGCGGGGTTGACAGAGGTATTGG                                     >  1:140362/1‑100                                                                    GCCATCGGCCTGGCCCTGACCCTGATCCACCTGATCTCGATCCCGGTGACCAATACCTCTGTCAACCCCGTGC‑TACGCGCGGGGTTGACAGAGGTATTGG                                     <  2:140362/100‑1                                                                                                                                 TCAACCCCGCGCGTA‑GCACGGGGTTGACAGAGGTATTGGTCACCGGGATCGAGATCAGGTGGATCAGGGTCAGG  >  1:658291/1‑74                                                                                                                                 TCAACCCCGCGCGTA‑GCACGGGGTTGACAGAGGTATTGGTCACCGGGATCGAGATCAGGTGGATCAGGGTCAGG  <  2:658291/74‑1                                                                                                                                                                                                             GGCGATGTTCCTGGTGGTCATCATGGGGGCGACCGACGCCCGCGCACCGGCAGGTTTTGCACCCATCGCCATCGGCCTGGCCCTGACCCTGATCCACCTGATCTCGATCCCGGTGACCAATACCTCTGTCAACCCCGCGCGTA‑GCACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4873239‑4873089 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggggTTGACAGAGGTATTGGTCACCGGGATCGAGATCAGGTGGATCAGGGTCAGG  >  NC_002947/4873108‑4873158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.