New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5914213 = | 21 (0.710) | 8 (0.350) | 7/190 | NT | 39.8% | intergenic (+49/+104) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
? | NC_002947 | 5914309 = | 8 (0.350) | intergenic (+145/+8) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
CCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914382‑5914213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTC > NC_002947/5914309‑5914446 CCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGG < 2:789177/150‑1 AAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGG > 1:423380/1‑102 AAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGG < 2:423380/102‑1 CCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGA > 2:537729/1‑69 CCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGA < 1:537729/69‑1 CCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCAAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGG > 1:658406/1‑150 CCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGG > 1:793599/1‑150 TCCCACAGGTAAGTCACAGTCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTC < 1:536050/95‑1 TCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTC > 2:536050/1‑95 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGG > 1:122836/1‑87 CCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGG < 2:122836/87‑1 CAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGACCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCG < 2:793599/150‑1 ATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCAAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGC < 2:658406/150‑1 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGC < 1:673710/150‑1 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG < 1:722720/140‑1 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG > 2:722720/1‑140 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAG > 1:71369/1‑97 GCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAG < 2:71369/97‑1 GCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTC > 1:168887/1‑150 GCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTC > 1:168812/1‑150 GGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCG > 2:45098/1‑128 GGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCG < 1:45098/128‑1 GGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC > 1:629833/1‑37 GGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTC < 2:629833/37‑1 CCGGCGGCGCGGGCTTCGCTGTACAACTACCAGCGCAATTCGAAGATTTTCGAGAAGCCCCTGTAAGCCTGGGCCGCCCTCTTCGCGGGCACGCCCGCTCCCACAGGTAAGTCACAGGCTTCAGCCTTCGAAATTACCCTGCGGGAGCGGGCGTGCCCGCGAAGAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5914382‑5914213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcgtgcccgcgaagagggcgGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAGTGCGCAGTGCGCGTAGTC > NC_002947/5914309‑5914446 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |