New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 482457	39 (1.320)	3 (0.110)	3/224	NT	7.3%	intergenic (‑94/+62)	PP_0396/yeaG	hypothetical protein/protein kinase
	?	NC_002947	= 482485	41 (1.520)					intergenic (‑122/+34)	PP_0396/yeaG	hypothetical protein/protein kinase

GGTTGACCGTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGTATAGCCACGCTCCACCATCCGGGTG  >  NC_002947/482309‑482603                                                                                                                                                     |                                                                                                                                                   ggTTGACCGTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCtgt                                                                                                                                                   >  1:384474/1‑150 (MQ=255)  gTTGACCGTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCtgtg                                                                                                                                                  <  1:39854/150‑1 (MQ=255)      aCCGTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGAcgc                                                                                                                                              >  1:667404/1‑150 (MQ=255)         gTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCggg                                                                                                                                           <  2:384474/150‑1 (MQ=255)             tctTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGgcagc                                                                                                                                       >  1:790647/1‑150 (MQ=255)              ctTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCggg                                                                                                                                           <  2:770803/145‑1 (MQ=255)              ctTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCggg                                                                                                                                           >  1:770803/1‑145 (MQ=255)                   tCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGcc                                                                                                                                 >  1:46783/1‑150 (MQ=255)                      tGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAAc                                                                                                                              <  1:786842/150‑1 (MQ=255)                       gCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACg                                                                                                                             >  1:720498/1‑150 (MQ=255)                            tCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAgg                                                                                                                        <  2:776313/150‑1 (MQ=255)                                gCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGcctggcgttggcattgctgcccgcgtcacagc                                                                                                                    <  1:310357‑M1/150‑33 (MQ=255)                                    cGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgc                                                                                                                >  2:720498‑M2/1‑142 (MQ=255)                                     ggTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgca                                                                                                               >  1:755735‑M2/1‑141 (MQ=255)                                         tataACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGcctggcgttggcattgctgcccgcgtcacagct                                                                                                                   >  1:678059‑M1/1‑109 (MQ=255)                                         tataACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGcctggcgttggcattgctgcccgcgtcacagct                                                                                                                   <  2:678059‑M1/142‑34 (MQ=255)                                          ataACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgcagcttg                                                                                                          <  2:41107/150‑1 (MQ=255)                                             aCGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCgg                                                                                                       <  2:46783/150‑1 (MQ=255)                                                  gCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGt                                                                                                  >  2:343057/1‑150 (MQ=255)                                                   cTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTa                                                                                                 >  2:773926/1‑150 (MQ=255)                                                     cATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGTTCGTAGc                                                                                               <  1:56599/150‑1 (MQ=255)                                                                  gTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTAtt                                                                                  <  2:238074/150‑1 (MQ=255)                                                                  gTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTAtt                                                                                  <  1:343057/150‑1 (MQ=255)                                                                          aTGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTc                                                                          <  1:520176/150‑1 (MQ=255)                                                                               gCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGAc                                                                     <  1:773926/150‑1 (MQ=255)                                                                                       ccACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTc                                                                                                    >  1:396810/1‑111 (MQ=255)                                                                                       ccACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTc                                                                                                    <  2:396810/111‑1 (MQ=255)                                                                                       ccACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGt                                                             >  1:26383/1‑150 (MQ=255)                                                                                         acaAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTcc                                                                         >  1:684072/1‑136 (MQ=255)                                                                                         acaAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTcc                                                                         <  2:684072/136‑1 (MQ=255)                                                                                         acaAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGAACGGTACGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTaa                                                           >  1:250996/1‑149 (MQ=255)                                                                                                   aGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGAca                                                 <  2:26383/150‑1 (MQ=255)                                                                                                      cacaAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGAcagca                                              >  2:236930/1‑150 (MQ=255)                                                                                                                    tGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTg                                >  1:290176/1‑150 (MQ=255)                                                                                                                      cAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAg                                                               <  2:587406/117‑1 (MQ=255)                                                                                                                      cAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAg                                                               >  1:587406/1‑117 (MQ=255)                                                                                                                          aaagaGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAAc                                                                                                                              >  1:356656/1‑50 (MQ=255)                                                                                                                          aaagaGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAAc                                                                                                                              <  2:356656/50‑1 (MQ=255)                                                                                                                          aaagaGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGta                          >  1:658851/1‑150 (MQ=255)                                                                                                                                   ccACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAgg                                                              <  2:31625/105‑1 (MQ=255)                                                                                                                                   ccACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAgg                                                              >  1:31625/1‑105 (MQ=255)                                                                                                                                     aCCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGTATAGCCACGCTc               >  1:66493/1‑150 (MQ=255)                                                                                                                                        cccgcTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGATTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGTATAGCCACGCTccac            <  2:290176/149‑1 (MQ=255)                                                                                                                                            cTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTa                                                            >  2:528064/1‑98 (MQ=255)                                                                                                                                            cTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTa                                                            <  1:528064/98‑1 (MQ=255)                                                                                                                                             tGCAAGCTGcctggcgttggcattgctgcccgcgtcacagcttgcagcggcggtggctgctctttcttgcagcttgaagcttgtggcttgcagcttgtgggttgcagctgcatccagtcaccggagggaccatgagctacgttatagacc       >  1:755735‑M1/1‑9 (MQ=255)                                                                                                                                             tGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGTATAGCCACGCTCCACCATcc       <  2:66493/150‑1 (MQ=255)                                                                                                                                              gCAAGCTGcctggcgttggcattgctgcccgcgtcacagcttgcagcggcggtggctgctctttcttgcagcttgaagcttgtggcttgcagcttgtgggttgcagctgcatccagtcaccggagggaccatgagctacgttatagaccg      >  2:720498‑M1/1‑8 (MQ=255)                                                                                                                                                 aGCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgcagcggcggtggctgctctttcttgcagcttgaagcttgtggcttgcagcttgtgggttgcagctgcatccagtcaccggagggaccatgagctacgttata           <  2:678059‑M2/142‑110 (MQ=255)                                                                                                                                                 aGCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgcagcggcggtggctgctctttcttgcagcttgaagcttgtggcttgcagcttgtgggttgcagctgcatccagtcaccggagggaccatgagctacgttata           >  1:678059‑M2/1‑33 (MQ=255)                                                                                                                                                  gCTGTGACGCGGGCAGCAATGCCAACGCCAGGcagcttgcagcggcggtggctgctctttcttgcagcttgaagcttgtggcttgcagcttgtgggttgcagctgcatccagtcaccggagggaccatgagctacgttatagaccgacgc  <  1:310357‑M2/150‑119 (MQ=255)                                                                                                                                                  gCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGAca                                                 >  2:110049/1‑103 (MQ=255)                                                                                                                                                  gCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGAca                                                 <  1:110049/103‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GGTTGACCGTGCTCTTGTTCTTGCCGTTCAGGCGTCGGTCTATAACGTAGCTCATGGTCCCTCCGGTGACTGGATGCAGCTGCAACCCACAAGCTGCAAGCCACAAGCTTCAAGCTGCAAGAAAGAGCAGCCACCGCCGCTGCAAGCTGTGACGCGGGCAGCAATGCCAACGCCAGGCAGCTTGCAGCTTGCGGCTCGTAGCTTGCCGCTTTATTGCGATTTCCTGACCCGCAGGTACCATTCCGACAGCAGGCGCACCTGTTTGTCGGTATAGCCACGCTCCACCATCCGGGTG  >  NC_002947/482309‑482603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.