New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1899413 = | 30 (1.020) | 4 (0.150) | 3/226 | NT | 10.9% | intergenic (+441/‑79) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
? | NC_002947 | 1899467 = | 38 (1.400) | intergenic (+495/‑25) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
Rejected: Coverage evenness skew score above cutoff. |
CCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTT > NC_002947/1899268‑1899560 | ccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcatgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACATCATCCCGGGCTGTCAACGTAAACAGCCCTCACCACTTCACGACAAAgg > 2:7221‑M2/64‑150 (MQ=255) tCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGc > 2:389694/1‑150 (MQ=255) tCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGc > 1:75424/1‑150 (MQ=255) cAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACaaa > 2:715148/1‑127 (MQ=255) cAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACaaa < 1:715148/127‑1 (MQ=255) gATATCCCTGTGGGAGCGGGCATGGCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGcc > 1:706722/1‑150 (MQ=255) atatCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATTAGCATGCCg < 1:390940/150‑1 (MQ=255) cTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATAGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAg > 1:696681/1‑150 (MQ=255) gcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCg < 2:364278‑M2/141‑1 (MQ=255) ccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGc < 1:146214‑M2/117‑1 (MQ=255) ccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGc > 2:146214‑M2/8‑124 (MQ=255) ccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGtt > 1:790921‑M2/8‑150 (MQ=255) cgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGttt < 1:583701‑M2/144‑1 (MQ=255) cgaaAGGTCCCGTATAGCTGTCCCATAAATTGCTGACATACCACATCCCGGGCTGGCAACGTCGACAGCCCTCACCACTTCCCGCCAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTc < 1:7221‑M2/146‑1 (MQ=255) aGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCcaca < 2:694089/150‑1 (MQ=255) gCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGc > 1:631626/1‑150 (MQ=255) ccATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCa > 2:660954/1‑150 (MQ=255) tGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGaa < 2:696681/150‑1 (MQ=255) gATCTACCTCATCCCGGGCTGTCAACGTCGCCAGCCCTCACAACTTCACAACCACGCCGCCCAGTTGCCGCGATTTCATTAGGATACAGGGCCAGCTGGTCCCCTTTTGAGTTTTCGAGCGTCGCGCGCGGATAGCCAATAGAGAAGTat > 2:332442/1‑149 (MQ=255) aTCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCca < 1:443105/117‑1 (MQ=255) aTCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCca > 2:443105/1‑117 (MQ=255) aTCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACg > 2:114056/1‑150 (MQ=255) tACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGa > 1:481038/1‑119 (MQ=255) tACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGa < 2:481038/119‑1 (MQ=255) aCCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGc > 1:681271/1‑150 (MQ=255) aTCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCAACAGGGGCCCGCCCATAGCCAACAGCGAAGTACGCAGCGTCTg > 2:762466/1‑150 (MQ=255) tCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGc < 1:198457/150‑1 (MQ=255) ggCTGTCGACGTTGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGc < 2:636409/139‑1 (MQ=255) ggCTGTCGACGTTGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGc > 1:636409/1‑139 (MQ=255) cTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACt < 1:114056/150‑1 (MQ=255) tCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTgcg > 1:745143/1‑150 (MQ=255) gTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTg > 1:595738/1‑150 (MQ=255) gTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTg < 1:184120/150‑1 (MQ=255) cAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgcgc > 2:630844/1‑71 (MQ=255) cAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgcgc < 1:630844/71‑1 (MQ=255) cccTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCgg > 1:391496/1‑150 (MQ=255) caccacTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATc < 2:631626/150‑1 (MQ=255) cacTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTc > 2:391203/1‑150 (MQ=255) ttCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATg > 1:22677/1‑150 (MQ=255) aCAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGtt < 2:75424/150‑1 (MQ=255) | CCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTT > NC_002947/1899268‑1899560 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |