New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2137517 | 32 (1.080) | 4 (0.140) | 4/234 | NT | 11.0% | coding (334/624 nt) | gstB | glutathione S‑transferase |
? | NC_002947 | = 2137523 | 34 (1.210) | coding (340/624 nt) | gstB | glutathione S‑transferase |
CTTGTGGGAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTACCTGTCCGGTGACCAGATCGGCATGGGC > NC_002947/2137369‑2137666 | ctTGTGGGAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCCTTCCTTCCCCt > 1:235365/1‑150 (MQ=255) ctTGTGGGAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCt > 2:577412/1‑150 (MQ=255) ggAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTg > 2:332968‑M2/1‑149 (MQ=255) ggAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCCGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTg < 2:381199‑M2/150‑2 (MQ=255) gAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTgg > 1:50159‑M2/1‑148 (MQ=255) gAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTgg < 2:667236‑M2/150‑3 (MQ=255) tACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGaa < 2:775039/150‑1 (MQ=255) tACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGaa < 1:679012/150‑1 (MQ=255) ccTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCgg < 1:500400/146‑1 (MQ=255) ccTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCgg > 2:500400/1‑146 (MQ=255) cTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGAc < 1:577412/150‑1 (MQ=255) tACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTgggg < 1:281484‑M2/116‑5 (MQ=255) tACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTgggg > 2:281484‑M2/1‑112 (MQ=255) gCACGGAGCAGCGCTGGTATCTGGCAGCTGAACGGCAGCGCTCCCTCGGTGACAAATGCATTGGCGTGAGTACATCTTCCGGCGCTACTCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTgg > 2:209869/1‑150 (MQ=255) ggCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAAcgcc > 2:238677/1‑150 (MQ=255) gTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGca < 2:723090/150‑1 (MQ=255) aCCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCAc < 1:165278/97‑1 (MQ=255) aCCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCAc > 2:165278/1‑97 (MQ=255) ccACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTgcgcg > 2:80630/1‑150 (MQ=255) ccACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCAGAACAggggccggaatggg < 1:453544‑M2/93‑15 (MQ=255) ccACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCAGAACAggggccggaatggg > 2:453544‑M2/1‑79 (MQ=255) ccACGCCAGCGCGCCCTGGCCGACAAATGGAAGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGa < 2:288679/124‑1 (MQ=255) ccACGCCAGCGCGCCCTGGCCGACAAATGGAAGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGa > 1:288679/1‑124 (MQ=255) cGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCaa < 2:22827/150‑1 (MQ=255) tGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGTTAGGGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTg < 1:209869/150‑1 (MQ=255) tGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACt > 1:674967/1‑142 (MQ=255) tGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACt < 2:674967/142‑1 (MQ=255) tggatggaCTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGTGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAAcc < 1:28825/150‑1 (MQ=255) tggatggaCTCGACCACATAATCCTTCGCTGCACCATTACGGTAACAGTTGGTGGGTCTTCTGCCCACGGCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAAcc < 2:372803/150‑1 (MQ=255) ggatggaCTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAAccc > 2:22867/1‑150 (MQ=255) ggactggacCACATCGTCCTTCGCTACCCCATTCCGGCCCCagaacaggggccg < 1:302190‑M1/54‑14 (MQ=255) ggactggacCACATCGTCCTTCGCTACCCCATTCCGGCCCCagaacaggggccg > 2:302190‑M1/1‑41 (MQ=255) tggacCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTgg > 2:205113/1‑81 (MQ=255) tggacCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTgg < 1:205113/81‑1 (MQ=255) tCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGTCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTTGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTAc < 2:266781/150‑1 (MQ=255) gTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTACCt < 2:235365/150‑1 (MQ=255) ccTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTa < 1:579835/145‑1 (MQ=255) ccTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTa > 2:579835/1‑145 (MQ=255) ttCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTAc > 1:688821/1‑144 (MQ=255) ttCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTAc < 2:688821/144‑1 (MQ=255) aCCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCGCGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTgg < 1:351036/103‑1 (MQ=255) aCCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCGCGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTgg > 2:351036/1‑103 (MQ=255) cccATTCCGGCCCCtgttctggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgg > 2:453544‑M1/1‑14 (MQ=255) cccATTCCGGCCCCtgttctggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgg < 1:453544‑M1/93‑80 (MQ=255) aTTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTACCTGTCCGGTGACCAGAt < 1:667236/150‑1 (MQ=255) tCCGCCCCCTGTTCTGGGGCCTTCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACCAAACCCTGGCCAGTCAGCCGTACCTGTCCGGTGACCAGATCg < 1:381199/150‑1 (MQ=255) cGGCCCCTGTTCTggggccggaatggggtagcgaaggacgatgtggtccagtcc < 1:302190‑M2/54‑42 (MQ=255) cGGCCCCTGTTCTggggccggaatggggtagcgaaggacgatgtggtccagtcc > 2:302190‑M2/1‑13 (MQ=255) gCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTACCTGTCCGGTGACCAGATCGGCAt > 1:70540/1‑150 (MQ=255) ccccagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccagccctgctccgtgccgta > 2:281484‑M1/1‑4 (MQ=255) ccccagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccagccctgctccgtgccgta < 1:281484‑M1/116‑113 (MQ=255) ccagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccagccctgctccgtgccgtactccgcgcacaggtagcggacgatggtgttggattc > 1:50159‑M1/1‑2 (MQ=255) ccagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccagccctgctccgtgccgtactccgcgcacaggtagcggacgatggtgttggattc < 2:667236‑M1/150‑149 (MQ=255) cagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccggccctgctccgtgccgtactccgcgcacaggtagcggacgatggtgttggattcc < 2:381199‑M1/150‑150 (MQ=255) cagaacaggggccggaatggggtagcgaaggacgatgtggtccagtccatccatttgtcggccagggcgcgctggcgtgggtctgccagataccagccctgctccgtgccgtactccgcgcacaggtagcggacgatggtgttggattcc > 2:332968‑M1/1‑1 (MQ=255) | CTTGTGGGAATCCAACACCATCGTCCGCTACCTGTGCGCGGAGTACGGCACGGAGCAGGGCTGGTATCTGGCAGACCCACGCCAGCGCGCCCTGGCCGACAAATGGATGGACTGGACCACATCGTCCTTCGCTACCCCATTCCGGCCCCTGTTCTGGGGCCTGCTGCGCACGCCGGAAGACCAGCGCGACTGGGTGGCGATCAACGCCGCGCACAAGCAGTGCGCGCAATTACTGGCCATTGCCGACGAAACCCTGGCCAGTCAGCCGTACCTGTCCGGTGACCAGATCGGCATGGGC > NC_002947/2137369‑2137666 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |