New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874604 =	46 (1.560)	4 (0.150)	4/224	NT	10.4%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874686 =	27 (1.000)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase

CCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTC  >  NC_002947/5874458‑5874748                                                                                                                                                   |                                                                                                                                                 cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcg                                                                                                                                               <  1:512739/150‑1 (MQ=255) cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcg                                                                                                                                               >  1:780981/1‑150 (MQ=255)  tggcggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTcgc                                                                                                                                              <  2:605575‑M1/5‑1 (MQ=255)  ccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgc                                                                                                                                              >  1:652910/1‑150 (MQ=255)    tGACGGCGAGCGCGCCAGGTCCAGAACGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCgg                                                                                                                                            <  1:346908/150‑1 (MQ=255)    gcggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCgg                                                                                                                                            >  2:684269‑M1/144‑150 (MQ=255)     cggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggcttagcggctaagctagggctgatggccctTTCGCggg                                                                                                                                           >  2:164924‑M1/143‑150 (MQ=255)        ggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgtccctgggctgagcggctaagctagggctgatggccctTTCGCGGGCtt                                                                                                                                        >  2:530058‑M1/140‑150 (MQ=255)          cGAGCGCGCCAGGTCCAGCGCGCCAGGCCCAGGGCGCCCGGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTCGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTAc                                                                                                                                      <  2:64662/150‑1 (MQ=255)                 gcCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTcc                                                                                                                               >  2:641637/1‑150 (MQ=255)                 gcCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTcc                                                                                                                               >  2:579948/1‑150 (MQ=255)                  ccAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCt                                                                                                                              <  2:471153/150‑1 (MQ=255)                   cAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTg                                                                                                                             >  1:456589/1‑150 (MQ=255)                      gTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCa                                                                                                                          >  1:213800/1‑150 (MQ=255)                                   ggCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGc                                                                                                             <  1:452673/150‑1 (MQ=255)                                      ccAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAgg                                                                                                                       >  2:161434/1‑137 (MQ=255)                                      ccAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAgg                                                                                                                       <  1:161434/137‑1 (MQ=255)                                           gcgcCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGc                                                                                                     <  1:390726/150‑1 (MQ=255)                                             gcCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCt                                                                                                   <  1:417695/150‑1 (MQ=255)                                                cAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTgcg                                                                                                >  2:481743/1‑150 (MQ=255)                                                   aaaCAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAg                                                                                             >  2:751491/1‑150 (MQ=255)                                                          agcGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCtgt                                                                                      <  1:727552/150‑1 (MQ=255)                                                                  ggCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCCTTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCgg                                                                              <  2:13801/150‑1 (MQ=255)                                                                   gCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCggg                                                                             <  1:641637/150‑1 (MQ=255)                                                                     gatgatGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGACGCCTGCGCAGTACCTGTGGGAGCGGGCa                                                                           >  2:80755/1‑150 (MQ=255)                                                                      ccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccccTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCaa                                                                          >  1:569184‑M1/78‑150 (MQ=255)                                                                       tgatgTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAg                                                                         <  1:769208/150‑1 (MQ=255)                                                                                  gggaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAgg                                                              >  1:398850‑M1/66‑150 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCgg                                                                              <  2:640830/133‑1 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCgg                                                                              >  1:640830/1‑133 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAggg                                                             <  2:213800/150‑1 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTACCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAggg                                                             >  1:689595/1‑150 (MQ=255)                                                                                    cTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGc                                                            <  2:652910/150‑1 (MQ=255)                                                                                        gaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATc                                                        <  1:299348‑M1/91‑1 (MQ=255)                                                                                         gCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCa                                                          >  1:151774/1‑147 (MQ=255)                                                                                         gCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCa                                                          <  2:151774/147‑1 (MQ=255)                                                                                            acccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGcc                                                    >  2:299348‑M1/56‑150 (MQ=255)                                                                                               tCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTa                                                 <  1:751491/150‑1 (MQ=255)                                                                                                 aGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAggg                                                             <  1:421870/136‑1 (MQ=255)                                                                                                 aGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAggg                                                             >  2:421870/1‑136 (MQ=255)                                                                                                         cATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGc                                       >  1:558450/1‑150 (MQ=255)                                                                                                         cATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGc                                       <  2:456589/150‑1 (MQ=255)                                                                                                           tctctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTc                                     >  1:720616/1‑150 (MQ=255)                                                                                                                  gtcttcCTTAACCTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAGGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAg                              <  2:301110/150‑1 (MQ=255)                                                                                                                  gtcgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAg                              <  2:558450/150‑1 (MQ=255)                                                                                                                       ccTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACa                         <  1:481743/150‑1 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTgg                                                                                    >  2:376938/1‑89 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGc                                                                        <  2:77722/101‑1 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGc                                                                        >  1:77722/1‑101 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                   <  1:190837/122‑1 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGccc                                                   >  2:190837/1‑122 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGc                                                     >  1:604811/1‑120 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGc                                                     <  2:604811/120‑1 (MQ=255)                                                                                                                         ttAAACTGGAATTTTGCCGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTgg                                                                                    <  1:376938/89‑1 (MQ=255)                                                                                                                               tGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAg                 >  2:54346/1‑150 (MQ=255)                                                                                                                                          ggTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTc      <  1:80755/150‑1 (MQ=255)                                                                                                                                           gTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCg     <  1:54346/150‑1 (MQ=255)                                                                                                                                              gCTTCGTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtc  <  1:42941/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTC  >  NC_002947/5874458‑5874748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.