New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1805898 =	25 (0.850)	5 (0.180)	4/236	NT	17.0%	coding (1090/1284 nt)	tilS	tRNA lysidine(34) synthetase TilS
	?	NC_002947	1805928 =	25 (0.880)					coding (1120/1284 nt)	tilS	tRNA lysidine(34) synthetase TilS

CCCTGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAA  >  NC_002947/1805792‑1806073                                                                                                                                         |                                                                                                                                                  cccTGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCaa                                                                                                                                      <  1:113052/150‑1 (MQ=255)  ccTGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAAc                                                                                                                                     >  2:155650/1‑150 (MQ=255)  ccTGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAAc                                                                                                                                     >  1:526637/1‑150 (MQ=255)    tGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGa                                                                                                                                   >  1:499399/1‑150 (MQ=255)     gATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGaa                                                                                                                                  <  1:352784/150‑1 (MQ=255)           ccGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAAcagcag                                                                                                                            <  2:562591/150‑1 (MQ=255)           ccGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAAcagcag                                                                                                                            >  1:562591/1‑150 (MQ=255)              gttggccaccgccagcaggcattcgccgtgatacagcaacggcaggcgcgagcgcaggaaatgcggcacctgctgttcgttgagcaggcgcttGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAgc                                                                                                                                                >  2:659137‑M1/94‑127 (MQ=255)              gttggccaccgccagcaggcattcgccgtgatacagcaacggcaggcgcgagcgcaggaaatgcggcacctgctgttcgttgagcaggcgcttGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAgc                                                                                                                                                <  1:659137‑M1/34‑1 (MQ=255)                    caccgccagcaggcattcgccgtgatacagcaacggcaggcgcgagcgcaggaaatgcggcacctgctgttcgttgagcaggcgcttGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAgc                                                                                                                                                >  2:714131‑M1/88‑121 (MQ=255)                    caccgccagcaggcattcgccgtgatacagcaacggcaggcgcgagcgcaggaaatgcggcacctgctgttcgttgagcaggcgcttGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAgc                                                                                                                                                <  1:714131‑M1/34‑1 (MQ=255)                       ccGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAGGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTc                                                                                                                >  2:702313/1‑150 (MQ=255)                           gCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTgc                                                                                                            >  1:184523/1‑150 (MQ=255)                            cAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAAc                                                                                                                                     >  1:509881/1‑124 (MQ=255)                            cAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAAc                                                                                                                                     <  2:509881/124‑1 (MQ=255)                                      gtgcgtCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTg                                                                                                 >  2:705931/1‑150 (MQ=255)                                             ttgttgGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAGGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGc                                                                                          <  1:702313/150‑1 (MQ=255)                                                       aGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACgg                                                                                <  1:777520/150‑1 (MQ=255)                                                                      gTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGc                                                                 >  1:343081/1‑150 (MQ=255)                                                                        tGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCTGTTGCTGTATCACGGCGAATGCCTGCTGGCgg                                                               <  1:635147/150‑1 (MQ=255)                                                                           gcATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTgg                                                            <  2:526637/150‑1 (MQ=255)                                                                                 ccTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAAcc                                                      >  2:474942/1‑150 (MQ=255)                                                                                                    aaTGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGc                                   <  2:616095/150‑1 (MQ=255)                                                                                                       gcttgaggtcccgccgaccacggccgggaacctcAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTg                                                             >  2:714131‑M2/35‑121 (MQ=255)                                                                                                       gcttgaggtcccgccgaccacggccgggaacctcAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTg                                                             <  1:714131‑M2/87‑1 (MQ=255)                                                                                                       gcttgaggtcccgccgaccacggccgggaacctcAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAAc                                                       <  1:659137‑M2/93‑1 (MQ=255)                                                                                                       gcttgaggtcccgccgaccacggccgggaacctcAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAAc                                                       >  2:659137‑M2/35‑127 (MQ=255)                                                                                                         tGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGAtt                              <  1:705931/150‑1 (MQ=255)                                                                                                           GAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGc                            <  2:721610‑M1/150‑1 (MQ=255)                                                                                                             ggtcccgccgaccacggccgggaaccttAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCACTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGTACAACCTGCCCGGGCTGGTGCAGGCGGATTGCCa                          >  2:662252‑M2/29‑150 (MQ=255)                                                                                                              GTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCaa                         <  1:426495‑M1/150‑1 (MQ=255)                                                                                                                 cccGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAAcc                                                      >  2:284605/1‑118 (MQ=255)                                                                                                                 cccGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAAcc                                                      <  1:284605/118‑1 (MQ=255)                                                                                                                   cGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCa                    <  1:474942/150‑1 (MQ=255)                                                                                                                       cGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTgg                <  2:770389/150‑1 (MQ=255)                                                                                                                             cggcggGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTa          <  1:644061/150‑1 (MQ=255)                                                                                                                                     cctcAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGaa  <  2:184523‑M2/146‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                  CCCTGATGGGCCGTTGCGGTTGCCGGGCAATGGTTGCGTGCGTCTTGTTGGCGCAGCCGTGCCGAGCGGGTTGCGCATTGCCTACCGTCAGGGGGGTGAAATGCTGGAGGTTCCCGGCCGTGGTCGGCGGGACCTCAAGCGCCTGCTCAACGAACAGCAGGTGCCGCATTTCCTGCGCTCGCGCCTGCCGTTGCTGTATCACGGCGAATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAA  >  NC_002947/1805792‑1806073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.