New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5743404	40 (1.350)	9 (0.340)	6/220	NT	19.8%	intergenic (‑181/+66)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
	?	NC_002947	= 5743432	37 (1.400)					intergenic (‑209/+38)	fbp/glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase

CGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCG  >  NC_002947/5743290‑5743565                                                                                                                                               |                                                                                                                                      cGAGTGATGAGACTCGACACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtg                                                                                                                                >  2:547348‑M2/1‑143 (MQ=255)  gAGTGATGAGACTCGCCACCGCTCTCAGACGGCATAATAGGTCGGTAGTTGAGCCTTCGACAGGCCGGTGGTCTCGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACATCGCAAGCCTTGAAGCTTGCGAGACacctgtgg                                                                                                                               >  2:346873‑M2/1‑142 (MQ=255)         gagaCTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCggg                                                                                                                        >  2:321350/1‑150 (MQ=255)          taaCTCGGCACTGCCGTCATACGGCACGACAGGTCTGTAGTTCACCTTTCGCCAGGCCGGTGATCTGGTTCTGAGTCCTTTCGCGGGCGCCGGCGCGGTCACATGTACAGCGCTAGCCTTGAAGCTTGCGGGACACCTGTGGGAGCGGGc                                                                                                                       <  2:309801/148‑1 (MQ=255)                        tctcAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACgg                                                                                                         >  2:641899/1‑150 (MQ=255)                                     aaTAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATc                                                                                            <  1:50492/150‑1 (MQ=255)                                                  ttCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgt                                                                                                                                 >  2:444923‑M2/1‑94 (MQ=255)                                                  ttCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgt                                                                                                                                 <  1:444923‑M2/100‑7 (MQ=255)                                                  ttCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCaa                                                                                         <  2:478605/140‑1 (MQ=255)                                                  ttCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCaa                                                                                         >  1:478605/1‑140 (MQ=255)                                                    cAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGAt                                                                             >  1:650230/1‑150 (MQ=255)                                                         ttCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCgg                                                                        >  1:597941/1‑150 (MQ=255)                                                          tCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGt                                                                       <  1:641899/150‑1 (MQ=255)                                                            gCCAGGCCTGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                     <  1:561523/150‑1 (MQ=255)                                                                 gCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCatat                                                                >  2:123803/1‑150 (MQ=255)                                                                     gtggtCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTcgc                                                            <  1:796906/150‑1 (MQ=255)                                                                     gtggtCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTcgc                                                            <  1:524055/150‑1 (MQ=255)                                                                         tCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAAt                                                        >  1:268423/1‑150 (MQ=255)                                                                           tGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATgg                                                      >  1:435487/1‑150 (MQ=255)                                                                                   tgtCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTcc                                              >  1:326847/1‑150 (MQ=255)                                                                                     tCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCa                                                                                >  2:133771/1‑114 (MQ=255)                                                                                     tCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCa                                                                                <  1:133771/114‑1 (MQ=255)                                                                                        aTTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCcgc                                                                                                               <  2:182407/80‑1 (MQ=255)                                                                                        aTTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCcgc                                                                                                               >  1:182407/1‑80 (MQ=255)                                                                                        aTTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCcgacga                                         <  2:597941/150‑1 (MQ=255)                                                                                             cgGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCATCACCTCAAACCAGTGACCTGCAGGGCGCGTTGGTGTGTTCTCACTGGGTTCGGGCCGACGAGAAcc                                    >  2:372933/1‑150 (MQ=255)                                                                                                  gcgcTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGccc                               >  1:41978/1‑150 (MQ=255)                                                                                                      tcgctcCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATcc                           >  2:787370/1‑150 (MQ=255)                                                                                                            ccACAGGTACGGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccg                     >  2:396686/1‑150 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgggcgtgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactc                     <  2:621006‑M2/150‑115 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgggcgtgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactc                     <  2:258930‑M2/150‑115 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgggcgtgcccgcgaacggccacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgt                                                      >  1:617740‑M2/1‑36 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgggcgtgcccgcgaacggccacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgt                                                      <  2:617740‑M2/117‑82 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgagcgcgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtg                                     <  2:791319‑M2/134‑99 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgagcgcgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtg                                     >  1:791319‑M2/1‑36 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGt                                                     <  1:135711/118‑1 (MQ=255)                                                                                                            ccACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGt                                                     >  2:135711/1‑118 (MQ=255)                                                                                                             cacaGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgagcgcgcccgcgaatggacacacaaccagaccaccg                                                                                      <  2:453273‑M2/84‑50 (MQ=255)                                                                                                             cacaGGTACAGCGCAAGCCTTGAAGCTTGCGAGACacctgtgggagcgagcgcgcccgcgaatggacacacaaccagaccaccg                                                                                      >  1:453273‑M2/1‑35 (MQ=255)                                                                                                              acaGGTACAGCGCAGGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATccgtgccgtg                   >  2:631556/1‑150 (MQ=255)                                                                                                                aggcagaGCGCAAGCCTTGAACCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGCCGAGAACCAGCCCATCCGTGCCGTGtt                 <  1:372933/144‑1 (MQ=255)                                                                                                                     cAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATa            <  2:650230/150‑1 (MQ=255)                                                                                                                       tcgcAAGCTTCAAGGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGACTCACCTCAATCCAATGCCTTCAAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAAACAGCCCATCCGTGCCGTGTTCAATAcc          >  1:176118/2‑150 (MQ=255)                                                                                                                           aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGtt                 <  1:220287/139‑1 (MQ=255)                                                                                                                           aaGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGtt                 >  2:220287/1‑139 (MQ=255)                                                                                                                              ccTTGAAGCTTGCGAGACacctgtgggagcgggcgtgcccgcgaatggacacacaaccagaccaccggcctggcgaaggctgaactaccgacctattgtgccgtctgagagccgtggcgagtctcatcactcgctagcccgtcactctcc   >  1:258930‑M2/1‑18 (MQ=255)                                                                                                                              ccTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgc   <  1:123803/150‑1 (MQ=255)                                                                                                                               cTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTgcg  >  2:471505/1‑150 (MQ=255)                                                                                                                                ttGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGt                                                >  2:742151/1‑103 (MQ=255)                                                                                                                                ttGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGt                                                <  1:742151/103‑1 (MQ=255)                                                                                                                                       ttGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                     <  1:482618/75‑1 (MQ=255)                                                                                                                                       ttGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTgg                                                                     >  2:482618/1‑75 (MQ=255)                                                                                                                                               |                                                                                                                                      CGAGTGATGAGACTCGCCACGGCTCTCAGACGGCACAATAGGTCGGTAGTTCAGCCTTCGCCAGGCCGGTGGTCTGGTTGTGTGTCCATTCGCGGGCGCGCTCGCTCCCACAGGTACAGCGCAAGCCTTGAAGCTTGCGAGACACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCG  >  NC_002947/5743290‑5743565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.