New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 35308957 (1.490)8 (0.260) 7/220 2.9 13.9% intergenic (+53/+65) hisF/cbcV imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
?NC_002947 = 353103 54 (1.790)intergenic (+67/+51) hisF/cbcV imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
Rejected: Frequency below/above cutoff threshold.

ACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/352918‑353089
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacagAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAAGATGCTGGC  <  NC_002947/353103‑352956
                                                                                                                                                                                                                                                                                                                                
ACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTC                                                                                                                                                                            <  1:109426/150‑1
     atgCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGG                                                                                                                                                                       >  1:907674/4‑150
     ATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGG                                                                                                                                                                       <  1:353450/150‑1
       TCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGCAGCACCGGCGTGCGCGCGGGAGCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCA                                                                                                                                                                     >  1:476114/1‑150
          GGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGC                                                                                                                                                                  >  1:334162/1‑150
                 CATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCGTGCCCGCgaa                                                                                                                                                           <  2:184659/150‑4
                                                TCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGG                                                                                                                            <  2:435057/150‑1
                                                  CACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGC                                                                                                                          <  1:461943/150‑1
                                                              TACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGC                                                                                                                      <  2:274904/142‑1
                                                              TACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGC                                                                                                                      >  1:274904/1‑142
                                                                 ACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCG                                                                                                                                                                         >  1:114480/1‑88
                                                                 ACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCG                                                                                                                                                                         <  2:114480/88‑1
                                                                            GGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGC                                                                                                                              >  1:774092/1‑120
                                                                            GGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGC                                                                                                                              <  2:774092/120‑1
                                                                               CAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGG                                                                                                                                                                        >  1:141829/1‑75
                                                                               CAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGG                                                                                                                                                                        <  2:141829/75‑1
                                                                                                                                CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGC                                                                                                                          <  1:453815/72‑1
                                                                                                                                CGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGC                                                                                                                          >  2:453815/1‑72
                                                                                                                                               GCCCTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGT                             <  2:381611/150‑1
                                                                                                                                                  CTTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTA                          <  1:134030/150‑1
                                                                                                                                                   TTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGT                             >  1:30186/1‑146
                                                                                                                                                   TTCGCGGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGT                             <  2:30186/146‑1
                                                                                                                                                        GGGCACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCC                    >  2:249547/1‑150
                                                                                                                                                            ACGCCCGCTCTCACAGAGATATGAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAG                <  2:803044/150‑1
                                                                                                                                                            ACGCCCGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAG                <  1:253321/150‑1
                                                                                                                                                            ACGCCCGCGCCCACAGAGATCTCAGCAAACCTGTGGGCACCGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAG                <  1:8819/150‑1
                                                                                                                                                                 CGCTCCCCCAGATATCTCAGCAAACCTGTGGGAGCGGGAGTGCCAGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATAAGCGACCGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAA           <  2:216380/150‑1
                                                                                                                                                                 CGCTCCCACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAA           <  2:589451/150‑1
                                                                                                                                                                        ACAGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAAGATGCTG    <  1:214583/150‑1
                                                                                                                                                                          AGAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAAGATGCTGGC  <  2:8148/150‑1
                                                                                                                                                                                                                                                                                                                                
ACGGCATTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/352918‑353089
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacagAGATCTCAGCAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCGGTCAATGGATCAGCGAACGACGATCCCGCGCGAAGCCATGTAGGCCTTGGCCTCCGGCACTGTGTACTCGCCAAAGTGGAAGATGCTGGC  <  NC_002947/353103‑352956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.