New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3126733 | 35 (1.410) | 8 (0.320) | 6/262 | 2.2 | 18.9% | coding (735/960 nt) | PP_2744 | ribose‑phosphate pyrophosphokinase family protein |
? | NC_002947 | = 3126760 | 34 (1.380) | coding (708/960 nt) | PP_2744 | ribose‑phosphate pyrophosphokinase family protein | |||||
Rejected: Frequency below/above cutoff threshold. |
CACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3126592‑3126733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGGCAGACGCTGCTACGCGCTGCCCAGG < NC_002947/3126760‑3126732 CACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCAGGCCTGCCGGCAGGCCGGa > 1:37885/1‑144 CACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCAGGCCTGCCGGCAGGCCGGa < 2:37885/145‑2 GCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGa > 1:537755/1‑76 GCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGa < 2:537755/77‑2 GCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGGGCAGACGCTGCTACGCGCTGCCCAGG > 1:67806/1‑71 GCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGGGCAGACGCTGCTACGCGCTGCCCAGG < 2:67806/71‑1 GGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGGGCAGACGCTGCTACGCGCTGCCCAG < 1:539847/65‑1 GGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCCGGGGCAGACGCTGCTACGCGCTGCCCAG > 2:539847/1‑65 CACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGGGTGGCCGCGGCCAGCATGCGGCTGGCTCCGGCCTGCCGGCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3126592‑3126733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGGCAGACGCTGCTACGCGCTGCCCAGG < NC_002947/3126760‑3126732 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |