| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5759460 = | 30 (1.210) | 4 (0.210) | 4/200 | 2.2 | 20.1% | intergenic (+13/+143) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
| ? | NC_002947 | 5759552 = | 9 (0.480) | intergenic (+105/+51) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB | |||||
TGCAGGAAGCGGGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5759637‑5759460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggcccgcGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCG > NC_002947/5759552‑5759697 TGCAGGAAGCGGGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAG < 1:151714/150‑1 AAGCGGGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGG < 1:395960/150‑1 AGCGGGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGG < 1:550526/150‑1 GGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTA > 1:107115/1‑150 TACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAG < 2:237010/150‑1 TGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGGAAACCCGCTCCTACAAGGGATTGCGCCGTTCCCTCGCCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCC > 1:333373/1‑150 GTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTATCCGCGAAGAGGCCC < 1:251812/150‑1 AGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGG < 1:2759/127‑1 AGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGG > 2:2759/1‑127 TTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCT < 1:303632/119‑1 TTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCT > 2:303632/1‑119 CCCGCTCCTACAGGGGATTGTGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGT < 1:22224/134‑1 CCCGCTCCTACAGGGGATTGTGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGT > 2:22224/1‑134 TAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATA > 2:422206/1‑119 TAGGAGCGGGTTTACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATA < 1:422206/119‑1 gGCGGGTTCACCCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGATTCACCCACTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTT < 1:410908/149‑1 CCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACA > 2:94419/1‑150 CCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTT < 1:455051/139‑1 CCGCGAAGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTT > 2:455051/1‑139 AGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTT < 1:609183/47‑1 AGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTT > 2:609183/1‑47 AGAGGCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCCTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACGGGCGACAGCATCA > 1:410072/1‑150 GCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGT > 1:530157/1‑128 GCCCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGT < 2:530157/128‑1 CCGCGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCG < 1:237010/150‑1 TGCAGGAAGCGGGTGAAGCGCCTACTGTGCAGTAATTACTGCCGGTTTCAAGAAAGCGCCTCTCGGGGCGCTTTTTTGTTGCCGGCGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGATTGCGCCGTTCCCTCGGCCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5759637‑5759460‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggcccgcGCCGGCAACAAAAAAGCGCCCCGAGAGGCGCTTTCTTGAAACCGGCAGTAATTACTGCACAGTAGGCGCTTCACCCGCTTCCTGCATACGCTGCATTTCTTGCGCGTACAGGGCGTCGAAGTTGACCGGCGACAGCATCAGCGCCG > NC_002947/5759552‑5759697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |