| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1947843 | 37 (1.490) | 5 (0.250) | 5/212 | 2.0 | 13.4% | intergenic (‑61/+109) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| ? | NC_002947 | = 1947910 | 35 (1.750) | intergenic (‑128/+42) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGT > NC_002947/1947707‑1947986 | ggCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGc < 2:365661/150‑1 (MQ=255) gCTGGGGATGGCGAGCATTTCCAGCAGTACGCGTATGAGATAGTCGCGTCCGGGTTGGGAGTTTCGTCGCCTGATGTTCCGGCCGCGGTTCTGGTTATATTCTGCCCGGTTTTTTGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg < 2:385339/150‑1 (MQ=255) gCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg < 1:107636/150‑1 (MQ=255) gCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg > 2:107636/1‑150 (MQ=255) cTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCgg < 2:475346/150‑1 (MQ=255) gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGccc < 1:401885/150‑1 (MQ=255) gCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGAAGAGAAAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCaa > 1:353366/1‑150 (MQ=38) tttCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGc > 2:584081/1‑150 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAccc < 1:202365/150‑1 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAccc > 2:101249/1‑150 (MQ=255) gaTAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg > 1:179267/1‑150 (MQ=255) aGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccg > 2:432556‑M1/1‑95 (MQ=255) gTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGgcgc > 2:396836/1‑150 (MQ=255) tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt > 2:200488/1‑133 (MQ=255) tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCt < 1:200488/133‑1 (MQ=255) gAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcga < 1:432556‑M1/150‑75 (MQ=255) gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGc < 2:66265/84‑1 (MQ=255) gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGc > 1:66265/1‑84 (MQ=255) gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaa < 2:596654‑M2/150‑13 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgcccatatagccggggccgctttgcggccctttcccgaaacaag > 1:192958‑M1/1‑70 (MQ=255) ttCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTCAGAGGTTTGTGGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaag < 1:478553‑M1/150‑81 (MQ=255) gACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccg < 1:208337‑M2/150‑18 (MQ=255) aTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCCGGCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCa > 1:618502/1‑95 (MQ=255) aTGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCa < 2:618502/95‑1 (MQ=255) tGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcc > 1:584081‑M2/1‑129 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg < 1:594050/74‑1 (MQ=255) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCg > 2:594050/1‑74 (MQ=255) tCCAGGCCTCCGGTCGGGTCAACAATTTGCAATCTTTTGGGAGCGGCCTTGTGTCGCGACtggggtgcgaatctcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctccca < 2:192958‑M1/150‑91 (MQ=255) cAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccaca < 1:245742‑M2/150‑26 (MQ=255) cAGGCCTCCGGCCGGGTTAAAATCTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGCCCGCACAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccaca < 2:520657‑M2/150‑26 (MQ=255) gcgggcgggTTAAAATGTTGCATTGTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCGCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGAACCCCATCCGCGACACAAGGTCGCTCCCACAAAAAGcc < 2:288820/149‑1 (MQ=25) ccGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCCTTCGCGAACCAAGGCAACTAGCACAAAAAGcc < 2:353366/150‑1 (MQ=37) cGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCGGGCAATATCGGCAGGGAAGCTGAGACCCGAGGGGGTCTTCGCACCCCGtttgcgacacaatgccgctcccacaacaacaca < 2:445360‑M2/150‑34 (MQ=255) ggTGGGGTTAAAATTTTGCAGTCTTGTGGGAGCGCCCTTGTTTCGCGAAAGGGCCGCAAAGCGTCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCTCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGa < 2:97498/150‑1 (MQ=37) gggTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGTGTCGCAAAGCGGCCCCGGTAATATTGGCAGGGCAGCTGTGACCCTAAGGGCGCTAGCGACGCCATTCTCGACACAAGCCGGTTCTAACAAAAAGCGGAGcgg > 2:256405/1‑148 (MQ=19) aaTTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAg > 1:489998/1‑150 (MQ=255) tgtgttgttgtgggagCGGCATTGTGTCGCAAAcggggtgcgaagaccccctcgggtctcagcttccctgccgatattgcccgggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccg < 2:445360‑M1/143‑118 (MQ=255) ttGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccgg > 1:81912/1‑150 (MQ=255) tgtgGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctg < 1:245742‑M1/150‑126 (MQ=255) tgtgGGAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctgtgcgggcctttcgcgacacaaggccgctcccacaagactgcaagattttaacccggccggaggcctg < 2:520657‑M1/150‑126 (MQ=255) tgGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGAGATTCGCACCCCAgtcgcgacacaaggccgctcccaaaagattgcaaattgttgacccgaccggaggcctgga < 2:192958‑M2/150‑61 (MQ=255) gggAGCGTCCTTGTGCCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTAt < 2:208337/150‑1 (MQ=255) ggAGCGGCTTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGTGCGATTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGATATg < 2:81110/150‑1 (MQ=255) ggAGCGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggaca > 1:584081‑M1/1‑21 (MQ=255) ggAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGTAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGTGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATg > 2:48902/1‑150 (MQ=255) ggAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGt > 1:477026/1‑130 (MQ=255) ggAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGt < 2:477026/130‑1 (MQ=255) cGGCCTTGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgattttgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtc < 1:208337‑M1/150‑134 (MQ=255) gCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa > 2:280564/1‑150 (MQ=255) cTTGTTTCGGGAAAGGGCCGCAAAGCGGCCCCGGCTATATGGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaa > 1:192958‑M2/1‑80 (MQ=255) cTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaaacctctgaaattttaacccgaccggaggcctggacatgtccgaa < 1:478553‑M2/150‑71 (MQ=255) ttGTGTCGCGAAtggggtgcgaagcgcccctagggtctcagcttcgctgccgatattgccggggccgctttgcggccctttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaac < 2:596654‑M1/150‑139 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg < 2:441900/61‑1 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAggg > 1:441900/1‑61 (MQ=255) tgtCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag < 1:596654/150‑1 (MQ=255) gtCGAGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAgg < 1:203316/150‑1 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAttcgcgacacaaggccgctcccacaagactgcaaaattttaacccgaccggaggcctggacatgtccgaacgactc < 1:432556‑M2/150‑77 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt < 1:280564/150‑1 (MQ=255) | GGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGT > NC_002947/1947707‑1947986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |