| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4893598 = | 40 (1.610) | 6 (0.300) | 5/210 | 2.0 | 16.5% | intergenic (+28/‑180) | pyk/PP_4302 | pyruvate kinase/urea transporter |
| ? | NC_002947 | 4893677 = | 29 (1.470) | intergenic (+107/‑101) | pyk/PP_4302 | pyruvate kinase/urea transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCC > NC_002947/4893452‑4893743 | tGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTcgc > 2:293645/1‑150 (MQ=255) gcccagtcggggcacgggttgacgaactgaatggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGaca < 1:585560‑M1/8‑1 (MQ=255) cAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGcc > 1:385759/1‑150 (MQ=255) aGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGACGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCg < 1:530383/150‑1 (MQ=255) gaacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTc > 1:467608‑M1/132‑150 (MQ=255) gcAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTcc < 1:155995/150‑1 (MQ=255) gCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAg > 1:394837/1‑150 (MQ=255) ttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAgg < 2:45760‑M1/26‑1 (MQ=255) gaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCAc < 1:321114‑M1/31‑1 (MQ=255) ccAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGcccc < 1:248940/150‑3 (MQ=255) cAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTCCCGTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACg > 1:364579/1‑150 (MQ=255) ccGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTg < 2:564435/150‑1 (MQ=255) gTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGc > 1:245831/1‑150 (MQ=255) gcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGt < 2:607091‑M1/52‑1 (MQ=255) ccGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCtgt < 1:145480/150‑1 (MQ=255) gtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCtgtg > 1:607091‑M1/92‑150 (MQ=255) gtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAACGGAATGCAGTCCCtgtg > 2:321114‑M1/92‑150 (MQ=255) cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCAC‑AGGGACTGCATTCCCttgtg < 1:293645/150‑5 (MQ=39) cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCAC‑AGGGACTGCATTCCCttgtg < 1:293234/150‑5 (MQ=39) cTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTggg > 2:419099/1‑150 (MQ=255) gCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGcc > 1:491220/1‑150 (MQ=255) cTTTCGGCAAGCCGGGTACGACTAACCCGCTGCGCAGCGGTACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCtt < 2:364579/150‑1 (MQ=39) tttCGGCAAGCCGGGTACGACTAACACGATGCGGCTCGAGACTTTGATCTGATATTGCCGGGGGCGCGTTGCGCCCCTTTCGCAACACTAGGCCGCTTCCACAAGGCCACGCCGGCCCAAGGGAATGCAGTCCCTGTGGGGGCGGCCTtg > 1:156339/1‑150 (MQ=255) ggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTtgt < 1:14154‑M1/72‑1 (MQ=255) ggCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGGACGGCCTTgtgtt > 2:626089/1‑149 (MQ=255) gcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTcgc > 2:14154‑M1/74‑150 (MQ=255) cGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTg > 2:237063/1‑150 (MQ=255) ggTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTAGa < 1:626089/150‑1 (MQ=255) cTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCaaa > 2:538165/1‑150 (MQ=255) acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGt < 1:300957/108‑1 (MQ=255) acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGt > 2:300957/1‑108 (MQ=255) gATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCACCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTTTCGCGATTGGAGGGCAAAGCCCTCCCTGAAt < 2:385759/150‑1 (MQ=255) tCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATAc > 1:332633/1‑150 (MQ=255) cGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATAcc < 1:66190/150‑1 (MQ=255) gATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAccc < 1:499582/150‑1 (MQ=255) tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGa < 1:419099/150‑1 (MQ=255) tGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAgg < 2:514719/116‑1 (MQ=255) tGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAgg > 1:514719/1‑116 (MQ=255) aTTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCgg > 1:45760/1‑150 (MQ=255) gggCGCGTTGCGCCCCTTTCGCGACACAAGTCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg < 2:542117/103‑1 (MQ=255) gggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAg > 1:542117/1‑103 (MQ=255) ggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg < 2:491220/150‑1 (MQ=255) ggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAg > 1:230489/1‑150 (MQ=255) cgcgTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGc < 2:394837/150‑1 (MQ=255) tGCGCTCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCATAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCaaa < 2:245831/150‑1 (MQ=255) gcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAagag > 2:585560/1‑150 (MQ=255) cccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATAc < 1:94135/111‑1 (MQ=255) cccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATAc > 2:94135/1‑111 (MQ=255) ccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGACCGGCCTTGCGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGcc > 2:314158/1‑150 (MQ=255) TCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGaa < 2:533597‑M1/103‑1 (MQ=255) TCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGaa > 1:533597‑M1/1‑103 (MQ=255) | TGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCC > NC_002947/4893452‑4893743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |