New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5724628 =	25 (1.010)	6 (0.250)	6/254	2.1	18.2%	coding (2394/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
	?	NC_002947	5724661 =	30 (1.250)					coding (2361/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
Rejected: Frequency below/above cutoff threshold.

TTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGC  >  NC_002947/5724481‑5724772                                                                                                                                                    |                                                                                                                                                 ttCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTAtt                                                                                                                                                <  2:34022/150‑1 (MQ=255)   aaaccgctggcatgccctgcatgatggcttcgtgcgggccgtggtcgacccgcggcagaatgccctggcctgtgccatggccactgcccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGa                                                                                                                                              <  1:338865‑M1/5‑1 (MQ=255)           aaCGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAgg                                                                                                                                      >  1:216450/1‑150 (MQ=255)                cAACAGCGGCGAATGCGGGTCATTGTTGATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCttt                                                                                                                                 <  1:433770/150‑1 (MQ=255)                                        gttgATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGGGGCACAATCCCACCGTGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTTAGCACCTCTTCAATCGCCTTGGc                                                                                                         >  1:504461/1‑150 (MQ=255)                                            aTCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAAcg                                                                                                     >  2:403705/1‑150 (MQ=255)                                                 gacccgcggcagaatgccctggcctgtgccatggccactgcccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTg                                                                                                           <  2:467643‑M1/40‑1 (MQ=255)                                                 gacccgcggcagaatgccctggcctgtgccatggccactgcccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTg                                                                                                           >  1:467643‑M1/100‑139 (MQ=255)                                                            caTCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACg                                                                                     <  1:403705/150‑1 (MQ=255)                                                               cGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCtt                                                                                  <  2:40743/150‑1 (MQ=255)                                                                  tCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGa                                                                               >  1:297561/1‑150 (MQ=255)                                                                                  gcatgCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGcc                                                               >  2:319326/5‑150 (MQ=255)                                                                                  cTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGcc                                                               >  1:597657/1‑150 (MQ=255)                                                                                   ccactgcccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCtt                                                                                                            <  1:353001‑M1/39‑1 (MQ=255)                                                                                   ccactgcccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCtt                                                                                                            >  2:353001‑M1/66‑104 (MQ=255)                                                                                         cccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAAt                                                                                                                  >  1:609611‑M1/60‑92 (MQ=255)                                                                                         cccgccatggccaggcggcaccgatcgaagcgttgcgtgccgagcgcgttgccaaggcgATTGAGGTCCAGGCCTTTCGGCCCGACTTCAAt                                                                                                                  <  2:609611‑M1/33‑1 (MQ=255)                                                                                         cacaCCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGc                                                                                                                                     >  1:215371/1‑73 (MQ=255)                                                                                         cacaCCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGc                                                                                                                                     <  2:215371/73‑1 (MQ=255)                                                                                              cTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGt                                                   >  1:568278/1‑150 (MQ=255)                                                                                               tGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTg                                                  <  2:597657/150‑1 (MQ=255)                                                                                                gCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTgg                                                                                                          <  1:613691/93‑1 (MQ=255)                                                                                                gCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTgg                                                                                                          >  2:613691/1‑93 (MQ=255)                                                                                                    gcgCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTACTAAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCAt                                             >  1:16132/3‑150 (MQ=255)                                                                                                         ggcggcTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGcac                                        >  2:270081/1‑150 (MQ=255)                                                                                                               tCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCa                                  >  2:191942/1‑150 (MQ=255)                                                                                                                    gCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCa                             <  2:216450/150‑1 (MQ=255)                                                                                                                     ccACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCAt                            >  2:542496/1‑150 (MQ=255)                                                                                                                                     cAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGAc            <  2:568278/150‑1 (MQ=255)                                                                                                                                       gagCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAgg                                <  2:360059/128‑1 (MQ=255)                                                                                                                                       gagCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAgg                                >  1:360059/1‑128 (MQ=255)                                                                                                                                               cGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGc  <  2:504461/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 TTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACGCACGCCACACATCGATCCATGCCGCATTGTGCTCGGCCCACACCTGCTCGTGCAGGCGGCTCAGTGCCACCGGGTCGCTGAGCAGAGCCAGGCGAGTATTGAGGTCCAGGCCTTTCGGCCCGACTTCAATCGCCTTGGCAACGCGCTCGGCACGCAACGCTTCGATCGGTGCCGCCTGGCCATGGCGGGCAGTGGCCATGGCACAGGCCAGGGCATTCTGCCGCGGGTCGACCACGGCCCGC  >  NC_002947/5724481‑5724772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.