New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4647641	7 (0.280)	4 (0.230)	4/186	2.0	40.1%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	7 (0.400)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter

ACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGC  >  NC_002947/4647528‑4647820                                                                                                                                                |                                                                                                                                                      aCCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgta                                                                                                                                                 >  2:600701‑M2/1‑144 (MQ=255)  cccGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCCTCGTCTAGAGCAGCCAGGAGGTGTAATCGGTCCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtag                                                                                                                                                >  1:232795‑M2/1‑143 (MQ=255)                       cGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg                                                                                                                                          <  2:558468‑M2/135‑14 (MQ=255)                       cGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg                                                                                                                                          >  1:558468‑M2/1‑122 (MQ=255)                             ttGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggcc                                                                                                                       <  1:389890‑M2/148‑33 (MQ=255)                             ttGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggcc                                                                                                                       >  2:389890‑M2/1‑116 (MQ=255)                                        aTCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggttta                                                                                                                                     <  1:122134‑M2/123‑19 (MQ=255)                                        aTCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggttta                                                                                                                                     >  2:122134‑M2/1‑105 (MQ=255)                                                                          tcCTGTGCCGGCCTCTTCGCGGGTAAACACGCTCCTACAGGATGGCCGCAGCCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGCTTACCCGCGAATAGGCCGGCCCAGACCGCAACAGTTTTCAATGCTGCGCGCCCGCCCGCTTCaa                                                                        >  2:127036/1‑150 (MQ=39)                                                                                 ccGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                                      >  2:628869‑M2/1‑64 (MQ=255)                                                                                 ccGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                                      <  1:628869‑M2/65‑2 (MQ=255)                                                                                            tcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTc                                                      <  1:447518/149‑1 (MQ=255)                                                                                              gggTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGATTCACCCGATTCTTGCACCGccccc                                                    >  2:447518/1‑149 (MQ=38)                                                                                                gTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccccgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccgcggcct                                                  <  2:122944‑M2/150‑102 (MQ=255)                                                                                                      ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCACGCCCGCCCGATGCACAAGCTCCTTGCACCGCTCCGACAAATGc                                            >  2:478184/1‑150 (MQ=38)                                                                                                          tCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcgg                                                                    <  2:33108‑M2/122‑84 (MQ=255)                                                                                                          tCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcgg                                                                    >  1:33108‑M2/1‑39 (MQ=255)                                                                                                           ccTACATTATGGCCTCAAGCCCAAACATTGTGCGCCCCCCTGTACGAGCTGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcaccac                                       <  1:227904/150‑1 (MQ=39)                                                                                                              aCAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggtg                                    <  1:164754‑M2/150‑116 (MQ=255)                                                                                                                                    cATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAACGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCa              <  1:478184/150‑1 (MQ=255)                                                                                                                                                cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCgcgc  >  2:605993/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                      ACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGC  >  NC_002947/4647528‑4647820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.