New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5856874	40 (1.610)	6 (0.250)	6/254	2.1	13.7%	coding (745/1392 nt)	PP_5133	membrane protein
	?	NC_002947	= 5856913	37 (1.550)					coding (784/1392 nt)	PP_5133	membrane protein
Rejected: Frequency below/above cutoff threshold.

TCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCCG  >  NC_002947/5856767‑5857062                                                                                                                                                   |                                                                                                                                                      tCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggc                                                                                                                                                    <  1:236188‑M2/150‑4 (MQ=255)  cgccgcCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggct                                                                                                                                                   >  2:110502‑M2/1‑146 (MQ=255)                  attcaCCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTg                                                                                                                                   <  1:399812/150‑1 (MQ=255)                    tcaCCTGACCCAAGCACGGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGt                                                                                                                                 <  2:240772/150‑1 (MQ=255)                        cTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATAc                                                                                                                             <  1:81939/150‑1 (MQ=255)                        cTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATAc                                                                                                                             >  1:373218/1‑150 (MQ=255)                          gACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACgg                                                                                                                           >  1:126087/1‑150 (MQ=255)                             ccAAGCACTGGGCTCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCct                                                                                                                        <  2:319060/150‑1 (MQ=255)                             ccAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATTCGGGCCAGCGGCGACGGTCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCct                                                                                                                        >  1:390749/1‑150 (MQ=255)                                    cTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGCCGACGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGccc                                                                                                                 >  2:533863/1‑150 (MQ=255)                                                ccGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCctgctgctg                                                                                                     >  2:378578/1‑150 (MQ=255)                                                  gtcgtTGCTGGGCTTCGCCGTGCCAGCGGCCGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGc                                                                                                   >  1:488630/1‑150 (MQ=255)                                                     gtTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCgg                                                                                                <  1:270378/150‑1 (MQ=255)                                                      ttGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTgg                                                                                                                                                     >  1:229400‑M2/1‑94 (MQ=255)                                                      ttGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTgg                                                                                                                                                     <  2:229400‑M2/96‑3 (MQ=255)                                                      ttGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCggg                                                                                               <  2:236188/150‑1 (MQ=255)                                                                  gCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGtgg                                                                                   <  2:126087/150‑1 (MQ=255)                                                                              gaAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAg                                                                       <  2:411139/150‑1 (MQ=255)                                                                                  ccATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGcc                                                                   >  1:226807/1‑150 (MQ=255)                                                                                           gcgcCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCct                                                                                                                        >  1:233484/1‑88 (MQ=255)                                                                                           gcgcCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCct                                                                                                                        <  2:233484/88‑1 (MQ=255)                                                                                           gcgcCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGCGCTGCTATACGGCCTGATGCCCTGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGcc                                                          <  1:548277/150‑1 (MQ=255)                                                                                                   ggcgACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTg                                                  >  2:181011/1‑150 (MQ=255)                                                                                                    gcgACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaat                                                            >  2:628786‑M2/1‑48 (MQ=255)                                                                                                    gcgACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaat                                                            <  1:628786‑M2/139‑92 (MQ=255)                                                                                                          gCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTgg                                           <  1:490881/150‑1 (MQ=255)                                                                                                           ccTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGc                                                                                         <  1:298051/103‑1 (MQ=255)                                                                                                           ccTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGc                                                                                         >  2:298051/1‑103 (MQ=255)                                                                                                            cTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGc                                         >  2:377711/1‑150 (MQ=255)                                                                                                             tGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacggtagggcgcccagtgcttgg                                                                       <  1:549417‑M2/119‑81 (MQ=255)                                                                                                             tGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgg                                                                       >  2:549417‑M2/1‑39 (MQ=255)                                                                                                                    ccTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGc                                                           >  2:241972/1‑124 (MQ=255)                                                                                                                    ccTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGc                                                           <  1:241972/124‑1 (MQ=255)                                                                                                                     cTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGAGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGc                                >  2:453776/1‑150 (MQ=255)                                                                                                                      tGGACGTGGCCCGCCAGGCCTGGGCTGGCAggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaa                                                             >  2:360584‑M2/1‑30 (MQ=255)                                                                                                                      tGGACGTGGCCCGCCAGGCCTGGGCTGGCAggctgtcgccgctggcgcggatcatggcttcgtcgggcacggcgaagcccagcaacgacgggagggcgcccagtgcttgggtcaggtgaa                                                             <  1:360584‑M2/120‑91 (MQ=255)                                                                                                                          cGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGTTCCGAGACGTTGCCCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTAcgc                           <  2:488630/150‑1 (MQ=255)                                                                                                                           gTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGaa                                                              <  2:114817/114‑1 (MQ=255)                                                                                                                           gTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGaa                                                              >  1:114817/1‑114 (MQ=255)                                                                                                                                ccGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACt                     >  1:513734/1‑150 (MQ=255)                                                                                                                                ccGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACt                     >  1:369413/1‑150 (MQ=255)                                                                                                                                    cAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGtggcgcca                                                                              <  1:73761/89‑3 (MQ=255)                                                                                                                                    cAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGtggcgcca                                                                              >  2:73761/1‑87 (MQ=255)                                                                                                                                    cAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTgcgc                 <  1:378578/150‑1 (MQ=255)                                                                                                                                      ggCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGa               <  2:513734/150‑1 (MQ=255)                                                                                                                                           gggCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCAc          <  2:390749/150‑1 (MQ=255)                                                                                                                                                   tggctgCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCcg  >  1:564505/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TCGCCGCCGACCCGTTCATTCACCTGACCCAAGCACTGGGCGCCCTCCCGTCGTTGCTGGGCTTCGCCGTGCCCGACGAAGCCATGATCCGCGCCAGCGGCGACAGCCTGCCAGCCCTGGACGTGGCCCGCCAGGCCTGGGCCAGCTGGCTGCTCGGCGTGGTGCTGGTATACGGCCTGCTGCCCCGCCTGCTGCTGGCCGGGTTATGCCTGTGGCGCTGGCGCCAGGGCCGTGAACGCCTGACGCTGGACCTGGGCCTGCCCGGCTACGCGCAACTGCGCGAGGCACTGATGCCG  >  NC_002947/5856767‑5857062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.