New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1114899	105 (1.160)	17 (0.230)	17/226	4.6	16.8%	intergenic (‑88/+91)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
	?	NC_002947	= 1114925	83 (1.120)					intergenic (‑114/+65)	rlmF/valS	ribosomal RNA large subunit methyltransferase F/valine‑‑tRNA ligase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGGTGGGCCTTGATCAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1114728‑1114899 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacacaaggccgctcccacaggaCGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCACCCGCGC  <  NC_002947/1114925‑1114779                                                                                                                                                                                                                                                                                                                                  AGGGTGGGCCTTGATCAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCG                                                                                                                                                                           >  1:1069365/1‑150   GGTGGGCCTTGATCAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGAC                                                                                                                                                                         <  1:594115/150‑1         CCTTGATCAGGCTGGGGAAGTCGTAGAGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGG                                                                                                                                                                   <  1:539943/150‑1          CTTGATCAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGC                                                                                                                                                                  >  1:1069739/1‑150                CAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCC                                                                                                                                                            <  1:1812650/150‑1                CAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCC                                                                                                                                                            <  1:718417/150‑1                  GGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCA                                                                                                                                                          <  1:619796/150‑1                   GCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCAC                                                                                                                                                         >  2:804583/1‑150                   GCTGGGGAAGTCGTAAACTCCCTAGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGTGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCAC                                                                                                                                                         >  2:2168583/1‑150                     gGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAG                                                                                                                                                       <  2:674859/149‑1                     TGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACACGGCCGCTCCCACAG                                                                                                                                                       <  2:674464/150‑1                         GAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGG                                                                                                                                                                   <  2:684636/134‑1                         GAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGG                                                                                                                                                                   >  1:684636/1‑134                            GTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGC                                                                                                                                                                            >  2:1486914/1‑122                            GTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGC                                                                                                                                                                            <  1:1486914/122‑1                             TCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGC                                                                                                                                                                            >  2:758901/1‑121                             TCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGC                                                                                                                                                                            <  1:758901/121‑1                                TAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACCGTTGGGGCCGCTGTACGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCA                                                                                                                                             >  1:645313/1‑150                                  GCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCTAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACC                                                                                                                                          >  2:1586820/1‑150                                                GGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACC                                                                                                                            >  1:1462579/1‑150                                                      GCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTG                                                                                                                      >  1:310133/1‑150                                                      GCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTG                                                                                                                      <  2:1462579/150‑1                                                         GGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGG                                                                                                                   <  1:628109/150‑1                                                           TGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGA                                                                                                                 <  2:310133/150‑1                                                                    GGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCT                                                                                                                       <  1:123543/135‑1                                                                    GGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCT                                                                                                                       >  2:123543/1‑135                                                                      TTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCC                                                                                                           >  2:784619/1‑145                                                                      TTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCC                                                                                                           <  1:784619/145‑1                                                                        TGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTC                                                                                                    <  2:1069739/150‑1                                                                                 TCATGGCAGTGTCTAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGG                                                                                           <  1:1586820/150‑1                                                                                                                       AGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAG                                                                                                                <  2:631549/91‑1                                                                                                                       AGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAG                                                                                                                >  1:631549/1‑91                                                                                                                           C‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTG                                                                                                                    <  1:208840/83‑1                                                                                                                           C‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTG                                                                                                                    >  2:208840/1‑83                                                                                                                                                     GCGACACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAA                        <  2:696142/150‑1                                                                                                                                                         CACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAA                    <  1:112276/150‑1                                                                                                                                                          ACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAAC                   <  2:910283/150‑1                                                                                                                                                          ACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAAC                   <  1:505563/150‑1                                                                                                                                                          ACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAAC                   <  1:736011/150‑1                                                                                                                                                          ACAAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAAC                   >  1:910283/1‑150                                                                                                                                                            AAGGCCGCTCCCACAGGACGGCGCCAACCTTCCAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCC                 >  1:804583/1‑150                                                                                                                                                            AAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCATCCCCAGGGTCTCCAAGCCACCGCTCGTATATGGGTGGACACTGCCATGACCCCGAACAAACCC                 >  1:923467/1‑150                                                                                                                                                            AAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGC                                                                                  <  1:59229/85‑1                                                                                                                                                            AAGGCCGCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGC                                                                                  >  2:59229/1‑85                                                                                                                                                                  GCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCAT                                 <  2:1656111/128‑1                                                                                                                                                                  GCTCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCAT                                 >  1:1656111/1‑128                                                                                                                                                                    TCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCA         >  2:1239754/1‑150                                                                                                                                                                    TCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCA         >  1:1399448/1‑150                                                                                                                                                                    TCCCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCA         >  2:1214143/1‑150                                                                                                                                                                      CCACAGGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCACC       >  1:1305314/1‑150                                                                                                                                                                           GGACGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCACCCGCGC  >  2:1643874/1‑150                                                                                                                                                                                                                                                                                                                                  AGGGTGGGCCTTGATCAGGCTGGGGAAGTCGTAGCGACCCTGGTGGCGGTTGCGCGGGTGCAGGGTGGGTTTGTTCGGGGTCATGGCAGTGTCCAGCCCTATACGAGCGGTGGCTTGAAGACC‑CTGGGGCTGCTGCGCAGCCCTTTTGCGACACAAGGCCGCTCCCACAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1114728‑1114899 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacacaaggccgctcccacaggaCGGCGCCAACCTTCAAGGCGCCACCCTCCTGTGGGAGCGGCCTTGTGTCGCAAAAGGGCTGCGCAGCAGCCCCAGGGTCTTCAAGCCACCGCTCGTATAGGGCTGGACACTGCCATGACCCCGAACAAACCCACCCTGCACCCGCGC  <  NC_002947/1114925‑1114779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.