| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1296580 = | NA (NA) | 28 (0.520) | 23/244 | 1.9 | NA | intergenic (‑327/‑239) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA/transposase |
| ? | NC_002947 | 1296616 = | NA (NA) | intergenic (‑363/‑203) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA/transposase | |||||
TCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1296737‑1296580‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccttttGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGT > NC_002947/1296616‑1296764 TCAGCTGATGCCTACAGGGACTTCACGCCGATAGCGTGCGCATCACTAGAGTCCGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGCCCCTACCGGGCCAAC > 1:259569/1‑150TCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 2:950179/1‑150TCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 1:1177104/1‑150TCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 2:1236846/1‑150 AGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCATCAGCAACTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCG > 2:736840/1‑150 GCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCTAACCGC > 1:1240865/1‑150 CTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCC > 2:780425/1‑150 CTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCC > 2:323364/1‑150 TGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCT > 2:363765/1‑150 GATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTT > 2:911023/1‑150 ATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTT > 1:563119/1‑150 ATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTT > 2:1340790/1‑150 ATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCGGTAGGGCCAGCCGCCTTT > 2:650580/1‑150 TGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTT < 1:456880/150‑1 GCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC < 2:62032/141‑1 GCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 1:62032/1‑141 ACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT < 1:650580/150‑1 AGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGT < 1:1057820/150‑1 GGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 1:896157/1‑133 GGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC < 2:896157/133‑1 GGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAG‑AAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAG < 1:137574/150‑1 GGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC > 1:274426/1‑94 GGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAAC < 2:274426/94‑1 TGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTT > 2:371561/1‑99 TGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTT < 1:371561/99‑1 AGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT < 1:391747/99‑1 AGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT > 2:391747/1‑99 ACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTCGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT < 2:881722/95‑1 ACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGTCGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT > 1:881722/1‑95 ACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTT > 2:307676/1‑85 ACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTT < 1:307676/85‑1 CCTAACAAATCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGG < 2:1482995/58‑1 CCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGG > 1:1482995/1‑58 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAG > 2:803771/1‑142 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAG < 1:803771/142‑1 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCA > 1:644757/1‑117 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCA < 2:644757/117‑1 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGA > 1:773550/1‑107 GCGGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGA < 2:773550/107‑1 GGCTGGCCCTACCGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTG > 1:320528/1‑150 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCG < 1:301430/126‑1 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCG > 2:301430/1‑126 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGT > 1:1338209/1‑79 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGT < 2:1338209/79‑1 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGA < 2:906626/56‑1 GGCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGA > 1:906626/1‑56 GCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGA < 2:1057820/150‑1 GCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATC > 2:1206874/1‑63 GCTGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATC < 1:1206874/63‑1 TGGCCCTACCGGGCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATT > 2:41545/1‑150 GCCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCA < 1:41545/150‑1 CCAACCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCAC < 2:456880/150‑1 CCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTAT > 1:109293/1‑150 CCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTAT > 1:1153100/1‑150 CCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTG < 1:1234570/117‑1 CCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGGCCCTG > 2:1234570/1‑117 CGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATG > 1:874287/1‑150 GCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGA > 2:714978/1‑150 GCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGA < 2:307632/150‑1 GCCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGA < 2:1021021/150‑1 CCTTTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAG < 1:452951/150‑1 TTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGA < 1:826202/150‑1 TTTGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGA < 2:952573/150‑1 TGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCGGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGT < 2:622034/150‑1 TGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGT < 2:254715/150‑1 TCAGCTGATGCCTACAGGGACTTCACGCCGATACCGTGCGGATCACTCTCCTACGCGGGTGTGCAGACACACACCAGTGCTGGCTACGATCTCTGTCCCGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1296737‑1296580‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccttttGCTTTGTTAGGGTTCGTGTGCGCGGGACAGAGATCGTAGCCAGCACTGGTGTGTGTCTGCACACCCGCGTAGGAGAGTGATCCGCACGGTATCGGCGTGAAGTCCCTGTAGGCATCAGCTGATTCAGCTGTGACCACGTATGAGAGAGT > NC_002947/1296616‑1296764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |