New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 529671 = | 28 (0.480) | 26 (0.480) | 14/246 | 3.6 | 49.7% | intergenic (+4/‑116) | PP_23SC/PP_5SC | 23S ribosomal RNA/5S ribosomal RNA |
? | NC_002947 | 1330247 = | NA (NA) | intergenic (+23/‑109) | PP_23SE/PP_5SE | 23S ribosomal RNA/5S ribosomal RNA | |||||
Rejected: Coverage evenness skew score above cutoff. |
GAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACC > NC_002947/529573‑529817 | gAAGACTACGACGTTGATAGGTTGGGGGGGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTa > 1:202233/1‑150 (MQ=11) gacgTTGATAGGTTGGGTTTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACaa < 1:560982/150‑1 (MQ=38) tGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATc < 2:1342915/150‑1 (MQ=255) tgtAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTc > 1:1158923/1‑150 (MQ=255) aaGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCt < 2:1158923/150‑1 (MQ=255) gcgcTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTgg < 2:640739/150‑1 (MQ=255) gcgcTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTgg < 1:649584/150‑1 (MQ=255) ggcTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGTAATCTGGTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTgtg < 2:49385/149‑3 (MQ=255) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTc > 1:279227/1‑146 (MQ=255) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTc < 2:279227/146‑1 (MQ=255) aGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGAAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACa > 1:247622/1‑150 (MQ=255) aCCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTg > 2:373710/1‑150 (MQ=255) aCCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTg < 1:321279/150‑1 (MQ=255) cAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTg < 1:1277575/126‑1 (MQ=255) cAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTg > 2:1277575/1‑126 (MQ=255) aTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAGGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCaa > 2:861263/1‑150 (MQ=255) tAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGa > 1:44705/1‑150 (MQ=255) ccGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCAt < 2:1050838/123‑1 (MQ=255) ccGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCAt > 1:1050838/1‑123 (MQ=255) gTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATTGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTga > 1:1275424/1‑150 (MQ=255) aGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATAGCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTgacga < 1:535652/150‑1 (MQ=255) ttGACCATATAACACCCAAACAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCAt > 2:1381803/1‑150 (MQ=255) cacCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATGTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGaa < 2:582014/150‑1 (MQ=255) acCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac > 1:1020363/1‑150 (MQ=255) acCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTAGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac > 1:1278899/1‑150 (MQ=255) aaGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTgacga > 1:821301/1‑129 (MQ=255) aaGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTgacga < 2:821301/129‑1 (MQ=255) aaGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAaccacc > 1:563052/1‑150 (MQ=255) | GAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGTGGTGGTGAAGACGAAAGACCCGAAAATTCGTAAGGCCACAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAACCACC > NC_002947/529573‑529817 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |