| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 684,844 | Δ1 bp | 5.5% | coding (1406/2400 nt) | cadA‑II ← | cadmium translocating P‑type ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 684,844 | 0 | T | . | 5.5% | 286.5 / 9.2 | 91 | coding (1406/2400 nt) | cadA‑II | cadmium translocating P‑type ATPase |
| Reads supporting (aligned to +/- strand): ref base T (44/42); new base . (2/3); total (46/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
AGGGCGCCGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCACCAG > NC_002947/684697‑684993 | aGGGCGCCGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTg < 2:1326175/150‑1 (MQ=255) gggCGCCGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGa < 2:699324/150‑1 (MQ=255) gggCGCCGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGATGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGa > 1:1067521/1‑150 (MQ=255) cGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGa < 2:629749/150‑1 (MQ=255) ccAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGc < 1:1165985/150‑1 (MQ=255) cAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGcc < 2:349596/150‑1 (MQ=255) cAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGcc < 1:1089558/150‑1 (MQ=255) aGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCg > 1:1012771/1‑150 (MQ=255) gCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTg < 2:426484/150‑1 (MQ=255) gCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTg < 2:32227/150‑1 (MQ=255) gTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGggcggc > 2:95517/1‑150 (MQ=255) gTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGggcggc > 2:1551531/1‑150 (MQ=255) gTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGggcggc < 1:1480318/150‑1 (MQ=255) cGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCgg < 1:540600/150‑1 (MQ=255) tCCAGCGCCTGGCTGTGAACCACATGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑ATGATGCCGTGGCGGGCGGCGACCCCGGTACCGGcc > 1:450189/1‑150 (MQ=255) cAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGACACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCAt < 1:1541881/150‑1 (MQ=255) aGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGGGGCGACCCCGGTACCGGCCATg > 2:26992/1‑150 (MQ=255) gcgcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGa < 2:964337/150‑1 (MQ=255) ccTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATcg > 1:1582609/1‑150 (MQ=255) cTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATcgc > 1:705398/1‑150 (MQ=255) gCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGGGGCGGGCGAATGCCCCGGTACCGGCCATGATCgcggc > 1:1282/1‑150 (MQ=255) tgtgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGCCCGCATGGGCAGCCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGcggcgg < 1:1176145/150‑1 (MQ=255) tgtgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGcggcgg < 1:1775781/150‑1 (MQ=255) tgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATc > 2:1719000/1‑99 (MQ=255) tgAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATc < 1:1719000/99‑1 (MQ=255) aaCCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCTTTGGAATCCGCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGt < 1:798425/150‑1 (MQ=255) aaCCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGt > 1:110917/1‑150 (MQ=255) accaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTg > 1:1866797/1‑150 (MQ=255) caccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGc < 1:882894/150‑1 (MQ=255) accTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCTTGATCGCGGCGGGCGTGGcc > 1:169089/1‑150 (MQ=255) accTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGcc > 2:1773382/1‑150 (MQ=255) accTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGcc > 1:759011/1‑150 (MQ=255) cTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAg < 1:95517/150‑1 (MQ=255) gCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑g > 1:1430980/1‑150 (MQ=255) cTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGAGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGCCCAgtgctggg < 2:1012771/150‑8 (MQ=255) cTGCCGGAGGAGAGGGTGCCAGTTTTGTAGAACTTTATTCGGCGTACCGCATTGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGCTCGCGGCGGGCGTGGCCAGGCCGA‑gg < 2:958595/150‑1 (MQ=255) ggAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGTCCAGGCCGA‑GGGCGCa < 1:353780/150‑1 (MQ=255) ggTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGACT‑ACCATGCCGTGGCCGCAAACCATCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAggg < 1:1673846/150‑1 (MQ=255) gctgggtttGGCGAACACGACGCGGTTGACCGCATGGGCTCGCTCCAGGGCTTCGGCATCCTGGATC‑AGGATGCCGGGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCAAGGCGGA‑GGTCGCAGGGGCAGGCGAt < 2:169089/144‑1 (MQ=255) gCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGATTTATTTCATC‑ACTGACCCTTTCAAAGCGGCGACCCCGGTACCGACCATGCTCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGAt < 1:1875724/150‑1 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCTCAGGGGCAGGCGATGa < 1:1004178/150‑1 (MQ=255) ttttGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGc > 2:150815/1‑69 (MQ=38) ttttGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGc < 1:150815/69‑1 (MQ=38) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGCCCCCGGTACCGGCCATGATCGCGGCGGGCGTgg < 1:1077496/110‑1 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTgg > 2:1077496/1‑110 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCTGGCCGA‑GGGCGCAGGGGCAGGCGAt > 1:1535266/1‑138 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGAt < 2:1535266/138‑1 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCacggc < 2:1067521/150‑1 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCacggc < 2:295413/150‑1 (MQ=255) cacTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTg < 2:468300/106‑1 (MQ=255) cacTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTg > 1:468300/1‑106 (MQ=255) acTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCacggcgacg > 2:1830024/1‑150 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTg > 2:1901227/1‑103 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTg < 1:1901227/103‑1 (MQ=255) tACGCGGTTGACCGCATGGACACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCa < 1:892914/86‑1 (MQ=255) tACGCGGTTGACCGCATGGACACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCa > 2:892914/1‑86 (MQ=255) gcgGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGtt < 2:1635422/150‑1 (MQ=255) ggTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGa > 1:1478951/1‑150 (MQ=255) aCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAgc < 2:110917/150‑1 (MQ=255) aCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAgc > 1:11061/1‑150 (MQ=255) aTGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑g < 2:128559/99‑1 (MQ=255) aTGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑g > 1:128559/1‑99 (MQ=255) aTGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGAAGGCCTTGATCAGCGCGGt > 2:725383/1‑150 (MQ=255) tGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGtt < 2:670203/150‑1 (MQ=255) gggCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATc < 2:8338/74‑1 (MQ=255) gggCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATc > 1:8338/1‑74 (MQ=255) gggCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATAATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGa > 2:743177/1‑138 (MQ=255) gggCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATAATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGa < 1:743177/138‑1 (MQ=255) gCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGGTGATCAGCGCGGTGTcc > 2:1144416/1‑150 (MQ=255) cACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑gg < 1:477943/95‑1 (MQ=255) cACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑gg > 2:477943/1‑95 (MQ=255) cACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGAt < 1:56487/136‑1 (MQ=255) cACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGAt > 2:56487/1‑136 (MQ=255) cACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCa > 2:1155849/1‑150 (MQ=255) cGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGACCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGc < 1:77832/150‑1 (MQ=255) gCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCACGACCGGGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGTGCGGTTTCCAGCg > 2:1598096/1‑150 (MQ=255) tCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGGGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAACGCGGTTTCCCGCggg > 1:365310/1‑149 (MQ=255) tCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGGGGCGACCCCGGTCCCGGCCATGATCGCGGGGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCCGGCGCTGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGt > 2:820151/1‑150 (MQ=255) tCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGt > 1:977367/1‑150 (MQ=255) cAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTAc < 1:1578417/150‑1 (MQ=255) cAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTAc > 1:1306480/1‑150 (MQ=255) gCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCcca < 1:1874275/150‑1 (MQ=255) cacGGCATCC‑TGATCAAGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagc > 1:821399/3‑150 (MQ=255) gCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCcagccagc > 1:1350531/1‑150 (MQ=255) gCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCcagccagc > 2:1428771/1‑150 (MQ=255) aTCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAgccagcca > 2:1692127/1‑150 (MQ=255) aTCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAgccagcca > 2:1691221/1‑150 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTCCCGGCCATGATCGCGGCGGGCAAGGCGCGGGCGAGGGGCGACAGCGTGGCCGA‑GGCGAGCGCGGCGACGGCGGGGGTCGGCGCGGGTTCCAGCGGTACCCCAGccagccacca > 2:1160305/1‑150 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccacca < 1:1428771/150‑1 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccacca > 1:1116319/1‑150 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccacca > 1:932371/1‑150 (MQ=255) ttGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccacccc > 2:1443991/1‑148 (MQ=255) ttGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccaccag > 2:1760516/1‑150 (MQ=255) | AGGGCGCCGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGA‑GGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCACCAG > NC_002947/684697‑684993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |