| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,277,464 | Δ1 bp | 5.1% | intergenic (‑89/+506) | PP_1116 ← / ← PP_5465 | resolvase family site‑specific recombinase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,277,464 | 0 | T | . | 5.1% | 250.0 / 5.3 | 78 | intergenic (‑89/+506) | PP_1116/PP_5465 | resolvase family site‑specific recombinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/35); new base . (2/2); total (41/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GCCAGAGTCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGAAAGTTTTT > NC_002947/1277319‑1277611 | gCCAGAGTCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTGGTTAGTGCAAATGGAAATTCTa > 2:954173/1‑150 (MQ=255)gCCAGAGTCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTa < 1:1628986/150‑1 (MQ=255)gCCAGAGTCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTa > 2:784290/1‑150 (MQ=255) tCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTcc < 1:275894/150‑1 (MQ=255) ttGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAAt > 2:806107/1‑150 (MQ=255) tctTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATgcgaa > 1:156914/1‑146 (MQ=255) tGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATg < 1:1730024/150‑1 (MQ=255) gTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTCTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATgta > 1:1770476/1‑148 (MQ=255) aTACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGt > 1:120426/1‑150 (MQ=255) cTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAA‑TCTAGAATTTccattt < 2:1825735/132‑5 (MQ=255) cTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAA‑TCTAGAATTTccattt > 1:1825735/1‑128 (MQ=255) tCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTgag > 1:1389936/1‑150 (MQ=255) ccGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTgag < 1:177727/149‑1 (MQ=255) cGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCTTCTGTGTATTAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATCTCTCAAATGACAAATGGAATGTTgaga < 1:448145/150‑1 (MQ=255) tGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTCTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGTAATGTTGAGAggtg < 2:1770476/150‑1 (MQ=255) aGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTaa < 1:1124896/150‑1 (MQ=255) aGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTaa < 2:1562968/150‑1 (MQ=255) caacaaCGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACa < 1:689844/150‑1 (MQ=255) caacaaCGCGTGTCATGATTATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACa < 2:1047177/150‑1 (MQ=255) acaacGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGt > 1:830894/1‑150 (MQ=255) caacGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTc < 2:1812447/150‑1 (MQ=255) aacGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCa > 2:791140/1‑150 (MQ=255) cGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAAc > 2:227124/1‑150 (MQ=255) ttGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATc < 2:369724/150‑1 (MQ=255) tCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGt > 1:1399379/1‑150 (MQ=255) cATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTCGGCAGAACTTTATTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGtt < 1:1176041/150‑1 (MQ=255) atgatgatgGCTCGTATGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTc < 2:1389936/150‑1 (MQ=255) tgatgGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGAAAATGGAAATTCTAG‑ATTTCCCAAAt < 2:968567/103‑1 (MQ=255) tgatgGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGAAAATGGAAATTCTAG‑ATTTCCCAAAt > 1:968567/1‑103 (MQ=255) atgGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGATGTGGTAACAGTCAACATCCGTTCGCAttt < 1:1801127/150‑1 (MQ=255) ggCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGa > 1:169387/1‑150 (MQ=255) gCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTa < 1:529767/86‑1 (MQ=255) gCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTa > 2:529767/1‑86 (MQ=255) tCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGtt < 2:760360/111‑1 (MQ=255) tCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGtt > 1:760360/1‑111 (MQ=255) cGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAAtc < 2:710927/150‑1 (MQ=255) cTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCGACATCCGTTCGCATTTGAAAtcgtc < 1:806107/150‑1 (MQ=255) cTGTGTATGAGGCCAATTTATCAACTGCCATCAGCATTTGTCCATTGGGTAAACCATCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAAtcgtc < 2:989995/150‑1 (MQ=255) gtgtATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATcgtcgt < 1:1767352/150‑1 (MQ=255) aTGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAg > 1:390994/1‑150 (MQ=255) tGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTTGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGa > 2:125269/1‑150 (MQ=255) gacgcAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGaaa > 1:1316518/5‑150 (MQ=255) gCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAAt > 1:1586059/1‑150 (MQ=255) gCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAAt > 1:372140/1‑150 (MQ=255) aaTTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGtt > 1:601637/1‑150 (MQ=255) tATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACa < 2:1236445/150‑1 (MQ=255) gcAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAgg < 2:577/149‑1 (MQ=255) tGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAA‑TCTAGAATTTccatt < 2:1573483/65‑4 (MQ=37) tGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAA‑TCTAG‑AATTTCCatt > 1:1573483/1‑63 (MQ=37) aTGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAggtggt < 1:43973/88‑1 (MQ=255) aTGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAggtggt > 2:43973/1‑88 (MQ=255) aTGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGc > 1:1167734/1‑150 (MQ=255) aTGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATCCTGTAGCGCGGCGGCAGTCAACATCCGTTCGCATTTGACATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGc > 1:1468363/1‑150 (MQ=255) tGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCa > 1:1010088/1‑150 (MQ=255) gTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCt > 1:1693353/1‑150 (MQ=255) aTTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGa > 1:1026482/1‑150 (MQ=255) ttGTCAATTGGGCAGACGGTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGAcc > 2:78680/1‑150 (MQ=255) cAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGc < 1:784290/150‑1 (MQ=255) gCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAAAAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGACaaaa > 2:896931/1‑149 (MQ=255) gACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGtt > 1:80305/1‑83 (MQ=255) gACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGtt < 2:80305/83‑1 (MQ=255) gACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCg < 2:601637/150‑1 (MQ=255) aCGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCgg > 1:85787/1‑150 (MQ=255) gttAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCt > 1:1433635/1‑150 (MQ=255) ttAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCtt > 2:36866/1‑150 (MQ=255) ttAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCtt > 1:636412/1‑150 (MQ=255) ttAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCtt > 2:441918/1‑150 (MQ=255) aGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAACGCTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGt < 2:268112/150‑1 (MQ=255) tGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGttt < 2:1010088/150‑1 (MQ=255) tGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGttt < 2:372140/150‑1 (MQ=255) tGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGttt > 1:226412/1‑150 (MQ=255) aaaTGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGaa > 2:1438390/1‑150 (MQ=255) aaaTGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGaa < 1:1438390/150‑1 (MQ=255) aaTGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTCaaa < 2:1764072/150‑1 (MQ=255) aTGGAAATTCTAG‑ATTTCCCAAATGACAAATGTAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGAt < 2:1498710/104‑1 (MQ=255) aTGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGAt > 1:1498710/1‑104 (MQ=255) ggAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACGGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGAAAGtt > 2:1740217/1‑150 (MQ=255) aaTTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGAAAGttttt < 1:954173/150‑1 (MQ=255) | GCCAGAGTCACCTTGACTCTTGGTAGATACTCGAATGTAAGCAACAACGTTTGTCATGATGATGGCTCGTCTGTGTATGAGGCCAATTTATCAACTGCCATGAGTATTTGTCAATTGGGCAGACGTTCGTTAGTGCAAATGGAAATTCTAG‑ATTTCCCAAATGACAAATGGAATGTTGAGAGGTGGTAACAGTCAACATCCGTTCGCATTTGAAATCGTCGTGCAGAAAATGTTGACAGGATGGCTTGCACCTGACCTTGCGAGAAATCCGGCATGCTTGTTTGAAAGTTTTT > NC_002947/1277319‑1277611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |