Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,698,852 Δ1 bp 5.7% coding (558/1014 nt) cheBC → chemotaxis response regulator protein‑glutamate methylesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,698,8520G. 5.7% 269.6 / 10.0 87coding (558/1014 nt)cheBCchemotaxis response regulator protein‑glutamate methylesterase
Reads supporting (aligned to +/- strand):  ref base G (35/47);  new base . (2/3);  total (37/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.60e-01

CGCAAGGTCGGTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACAGAA  >  NC_002947/1698705‑1699001
                                                                                                                                                   |                                                                                                                                                      
cGCAAGGTCGGTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCGTCGTGCTGGTCCAGCa                                                                                                                                                      <  2:972931/150‑1 (MQ=255)
 gCAAGGTCGGTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCAt                                                                                                                                                     >  2:180091/1‑150 (MQ=255)
   aaGGTCGGTGGCTGCACCGCTGCGCGGGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCAtgt                                                                                                                                                  <  1:782153/150‑1 (MQ=255)
       tCGGTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCAGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGAc                                                                                                                                              <  2:985260/150‑1 (MQ=255)
         ggTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCACATGCTGGACCa                                                                                                                                            <  1:1575143/150‑1 (MQ=255)
          gTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTAAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAg                                                                                                                                           >  1:345683/1‑150 (MQ=255)
          gTGGCTGCACCGCTGCGCGAGGCTTCAAAGCGCTGTATTTTTTGGTCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAg                                                                                                                                           <  1:1373807/150‑1 (MQ=255)
            ggCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGgt                                                                                                                                         <  1:540285/150‑1 (MQ=255)
                gCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGttt                                                                                                                                     <  1:508837/150‑1 (MQ=255)
                  aCCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGc                                                                                                                                   >  2:1165079/1‑150 (MQ=255)
                  aCCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGc                                                                                                                                   >  1:546879/1‑150 (MQ=255)
                     gCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGc                                                                                                                                >  2:1773774/1‑150 (MQ=255)
                       tGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAg                                                                                                                              <  1:236385/150‑1 (MQ=255)
                       tGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAg                                                                                                                              <  1:1165079/150‑1 (MQ=255)
                       tGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAg                                                                                                                              <  2:1768941/150‑1 (MQ=255)
                        gcgcGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAgg                                                                                                                             <  1:771300/150‑1 (MQ=255)
                            gAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATg                                                                                                                         <  1:640824/150‑1 (MQ=255)
                             gggCTTCCCGGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATgg                                                                                                                        <  2:540796/149‑1 (MQ=255)
                             aGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATgg                                                                                                                        <  1:632585/150‑1 (MQ=255)
                             aGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATgg                                                                                                                        >  2:185941/1‑150 (MQ=255)
                                 ttCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGa                                                                                                                    >  2:1239783/1‑150 (MQ=255)
                                  tCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGaa                                                                                                                   >  1:1722175/1‑150 (MQ=255)
                                    ccAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCGGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATg                                                                                                                 >  1:124444/1‑150 (MQ=255)
                                    ccAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATg                                                                                                                 >  1:1633447/1‑150 (MQ=255)
                                    ccAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATg                                                                                                                 >  1:1891988/1‑150 (MQ=255)
                                    ccAGCGCCGCGGGTTGGTGGCAATCGGGTATTCGGCGGGTGGCCCGGCACCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATg                                                                                                                 >  1:1887010/1‑150 (MQ=255)
                                           cgcgGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTcagc                                                                                                          <  2:1529644/150‑1 (MQ=255)
                                              gggTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTACTGCATGTTTACGAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCagcagc                                                                                                       <  1:1773774/150‑1 (MQ=255)
                                                    gtggCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCgcagca                                                                                                 <  1:1159948/150‑1 (MQ=255)
                                                    gtggCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCgcagca                                                                                                 >  2:758787/1‑150 (MQ=255)
                                                      ggCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAgg                                                                                               <  2:802519/150‑1 (MQ=255)
                                                        cAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGcc                                                                                             >  1:21541/1‑150 (MQ=255)
                                                         aaTCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCt                                                                                            >  2:1659161/1‑150 (MQ=255)
                                                             gggTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAAt                                                                                                                  <  1:41124/124‑1 (MQ=255)
                                                             gggTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAAt                                                                                                                  >  2:41124/1‑124 (MQ=255)
                                                               gTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGt                                                                                      <  2:546879/150‑1 (MQ=255)
                                                               gTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGt                                                                                      <  2:54789/150‑1 (MQ=255)
                                                                 cTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTgc                                                                                    <  1:1528878/150‑1 (MQ=255)
                                                                 cTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTgc                                                                                    <  2:1722175/150‑1 (MQ=255)
                                                                   tCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTgcgc                                                                                  <  2:1602498/150‑1 (MQ=255)
                                                                               ctgggagcaCTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGaa                                                                      <  1:1423305/145‑1 (MQ=255)
                                                                               ccGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAAt                                                                                                                  <  1:964791/106‑1 (MQ=255)
                                                                               ccGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAAt                                                                                                                  >  2:964791/1‑106 (MQ=255)
                                                                               ccGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGaa                                                                      <  1:185941/150‑1 (MQ=255)
                                                                                     gcaCTCGAAGTGCGGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGaa                                                                <  2:1340609/150‑1 (MQ=255)
                                                                                       aCTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAgg                                                                    <  1:862839/144‑1 (MQ=255)
                                                                                       aCTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAgg                                                                    >  2:862839/1‑144 (MQ=255)
                                                                                         tCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAAccgc                                                            <  2:21541/150‑1 (MQ=255)
                                                                                         tCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCACAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAAccgc                                                            >  1:416418/1‑150 (MQ=255)
                                                                                                   gctCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAgg                                                  <  1:741450/150‑1 (MQ=255)
                                                                                                    ctCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAggg                                                 >  1:1318666/1‑150 (MQ=255)
                                                                                                     tCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGc                                                <  1:1239783/150‑1 (MQ=255)
                                                                                                     tCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGCGCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGc                                                >  2:1316300/1‑150 (MQ=255)
                                                                                                       aaGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAggg                                                 <  1:1154403/147‑1 (MQ=255)
                                                                                                       aaGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAggg                                                 >  2:1154403/1‑147 (MQ=255)
                                                                                                       aaGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAg                                              <  2:847198/150‑1 (MQ=255)
                                                                                                       aaGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCACATGCTGGACCa                                                                                                                                            <  1:1509584/56‑1 (MQ=37)
                                                                                                       aaGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCACATGCTGGACCa                                                                                                                                            >  2:1509584/1‑56 (MQ=37)
                                                                                                        aGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCTTGAAGGCGAACCGCCGCAGCCAGGGCAgg                                             <  1:838812/150‑1 (MQ=255)
                                                                                                        aGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAgg                                             <  1:524215/150‑1 (MQ=255)
                                                                                                        aGGGTTCGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGACCCGCCGCAGCCAGGGCAgg                                             <  2:1513509/150‑1 (MQ=255)
                                                                                                            tttGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACt                                         >  2:1156280/1‑150 (MQ=255)
                                                                                                            tttGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACt                                         >  1:1201607/1‑150 (MQ=255)
                                                                                                             ttGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTc                                        <  2:345683/150‑1 (MQ=255)
                                                                                                                 cGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTgg                                    <  1:1659161/150‑1 (MQ=255)
                                                                                                                  ggCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGc                                   <  1:1404504/150‑1 (MQ=255)
                                                                                                                  ggCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGc                                   <  2:1309919/150‑1 (MQ=255)
                                                                                                                   gCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGcc                                  >  2:779527/1‑150 (MQ=255)
                                                                                                                     aGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCgg                                >  2:1405267/1‑150 (MQ=255)
                                                                                                                     aGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCgg                                <  2:722250/150‑1 (MQ=255)
                                                                                                                                   cgatcttGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATTTCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACcaca                  <  2:1790427/144‑1 (MQ=255)
                                                                                                                                    cATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAgg                                                                    <  1:120843/99‑1 (MQ=255)
                                                                                                                                    cATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAgg                                                                    >  2:120843/1‑99 (MQ=255)
                                                                                                                                     aTCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCa                                                    <  2:834704/114‑1 (MQ=255)
                                                                                                                                     aTCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCa                                                    >  1:834704/1‑114 (MQ=255)
                                                                                                                                        gTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGc             <  2:1633447/150‑1 (MQ=255)
                                                                                                                                         tGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGcc            <  2:124444/150‑1 (MQ=255)
                                                                                                                                          gCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATg                                                                                                                         >  1:1110309/1‑40 (MQ=255)
                                                                                                                                          gCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATg                                                                                                                         <  2:1110309/40‑1 (MQ=255)
                                                                                                                                          gCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCt           >  1:1576624/1‑150 (MQ=255)
                                                                                                                                          gCTGGTCCAGCATGTGGACCAGGTGTTTATCTTAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCGGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACAtagatcg           >  1:1790427/1‑144 (MQ=255)
                                                                                                                                          ccTGGTCCACATGCTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAg                                              <  2:1094713/114‑1 (MQ=255)
                                                                                                                                          ccTGGTCCACATGCTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAg                                              >  1:1094713/2‑115 (MQ=255)
                                                                                                                                               tCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGGGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTAc      >  2:1874772/1‑150 (MQ=255)
                                                                                                                                                ccAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACa     >  1:522963/1‑150 (MQ=255)
                                                                                                                                                 cAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCCGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACAg    >  2:457753/1‑150 (MQ=255)
                                                                                                                                                 cAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACAg    >  1:221928/1‑150 (MQ=255)
                                                                                                                                                   gCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAGTGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACAGaa  <  2:400984/150‑1 (MQ=255)
                                                                                                                                                   gCATGTGGACCAGGTGTTTGCCGCAGGCATGGCAGAATGGCTCAGCAGCGCAGCAGGCATGCCGGTGCGGCTGGCCCGTGAAGGCGAACGTCCGCAGCCAGGGCAGATACTCCTGGCCGGTGCGAACCACGGCAGTCGCCTGCTACAGaa  >  2:86991/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
CGCAAGGTCGGTGGCTGCACCGCTGCGCGAGGCTTCCCAGCGCCGCGGGTTGGTGGCAATCGGGTCTTCGGCGGGTGGCCCGGCAGCACTCGAAGTGCTGCTCAAGGGTTTGCCGGCAGCGTTTCCGGCGGCCATCGTGCTGGTCCAGCATGTGGACCAGGTGTTTGCCGCAGGCATGGCCGAATGGCTCAGCAGCGCAGCAGGCCTGCCGGTGCGCCTGGCCCGTGAAGGCGAACCGCCGCAGCCAGGGCAGGTACTCCTGGCCGGTACCAACCACCACATTCGCCTGCTACAGAA  >  NC_002947/1698705‑1699001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: