Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,404,288 Δ1 bp 6.2% coding (872/1209 nt) PP_2106 → ammonium transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,404,2880T. 6.2% 219.8 / 10.1 80coding (872/1209 nt)PP_2106ammonium transporter
Reads supporting (aligned to +/- strand):  ref base T (37/35);  new base . (3/2);  total (41/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.24e-01

GATGGCCATGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAGGTGGCGTTGGGT  >  NC_002947/2404142‑2404436
                                                                                                                                                   |                                                                                                                                                     
gATGGCCATGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCtggt                                                                                                                                                    <  1:671232/150‑1 (MQ=255)
 aTGGCCATGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCtggtg                                                                                                                                                   >  2:1675967/1‑150 (MQ=255)
     ccATGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGAGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑AGGCCGGTGG‑Cga                                                                                                                                              <  2:388567/150‑2 (MQ=255)
       aTGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑Cgggg                                                                                                                                            >  2:234265/1‑150 (MQ=255)
         ggtgggtgGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGgc                                                                                                                                          >  1:677076/1‑150 (MQ=255)
              gtggCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGt                                                                                                                                     >  1:47287/1‑150 (MQ=255)
              gtggCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGt                                                                                                                                     <  2:1433513/150‑1 (MQ=255)
               tggCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTATGCATCAAGGCCCGCTGGCCGGGCTGGTTTCGATTAGTTCATGGGCCTATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGtt                                                                                                                                    >  2:1161559/1‑150 (MQ=255)
                 gCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTg                                                                                                                                  >  2:1378432/1‑150 (MQ=255)
                 gCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGATCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTg                                                                                                                                  >  1:1303562/1‑150 (MQ=255)
                  cACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCtggtg                                                                                                                                                   >  1:768294/1‑133 (MQ=255)
                  cACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCtggtg                                                                                                                                                   <  2:768294/133‑1 (MQ=255)
                  cACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGt                                                                                                                                 >  1:1685174/1‑150 (MQ=255)
                  cACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGt                                                                                                                                 <  1:234265/150‑1 (MQ=255)
                   ccccTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTc                                                                                                                                <  1:1856237/149‑1 (MQ=255)
                    cccTTTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCt                                                                                                                               >  2:1268940/1‑150 (MQ=255)
                    cccTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGCGGTCTGTTTGTCt                                                                                                                               <  1:921378/150‑1 (MQ=255)
                        gTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGAc                                                                                                                           >  2:1240423/1‑150 (MQ=255)
                         tCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGGGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGAcc                                                                                                                          >  2:279273/1‑150 (MQ=255)
                              gTTGCTGGCCGGGCGCAACGACCGGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCGGGTGGCGGTTTGCGCAGGTTCCGATCTGATTCGCCCGGGGGGTGCGCTCGCGACC‑GGCCTGGTGG‑CGGGGGCGGTGTTTGTCTGGaggttaac                                                                                                                     >  1:185865/1‑143 (MQ=255)
                                       cGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCa                                                                                                            >  1:847587/1‑150 (MQ=255)
                                          gcgcAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTTGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCaaaa                                                                                                         <  1:1445262/150‑1 (MQ=255)
                                          gcgcAACGACCCAGGCTTTCTCCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCaaaa                                                                                                         <  1:883389/150‑1 (MQ=255)
                                              aaCGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑Cgg                                                                                                                                              >  2:173305/1‑109 (MQ=255)
                                              aaCGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑Cgg                                                                                                                                              <  1:173305/109‑1 (MQ=255)
                                              aaCGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGc                                                                                                     >  2:203792/1‑150 (MQ=255)
                                               aCGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCt                                                                                                    <  2:23503/150‑1 (MQ=255)
                                                 gACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTgg                                                                                                  <  2:1923574/150‑1 (MQ=255)
                                                    ccGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGaaa                                                                                               >  1:29785/1‑150 (MQ=255)
                                                     cGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCCCCCGCCACCAGGCC‑GGTGG‑Cgag                                                                                                                                             <  1:27929/103‑3 (MQ=38)
                                                     cGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCCCCCGCCACCAGGCC‑GGTGG‑Cgag                                                                                                                                             >  2:27929/1‑101 (MQ=38)
                                                          tttCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACCAGGCC‑GGTGG‑Cgag                                                                                                                                             >  1:437521/1‑96 (MQ=255)
                                                          tttCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATcgac                                                                                         <  1:1240423/150‑1 (MQ=255)
                                                          tttCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑AGGCCGGTGG‑Cgag                                                                                                                                             <  2:437521/98‑3 (MQ=255)
                                                              tGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATcgacga                                                                                       >  2:1710045/1‑148 (MQ=255)
                                                              tGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATcgacga                                                                                       <  1:1710045/148‑1 (MQ=255)
                                                              tGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGacgacg                                                                                     >  1:1730438/1‑150 (MQ=255)
                                                              tGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGacgacg                                                                                     >  1:519633/1‑150 (MQ=255)
                                                               gCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGt                                                                                    >  1:733612/1‑150 (MQ=255)
                                                                 aTAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTcc                                                                                  >  1:1362688/1‑150 (MQ=255)
                                                                  tAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCt                                                                                 <  2:579971/150‑1 (MQ=255)
                                                                   aaCGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTg                                                                                <  2:47287/150‑1 (MQ=255)
                                                                   aaCGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTg                                                                                >  2:146359/1‑150 (MQ=255)
                                                                      ggCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGc                                                                             <  2:909226/150‑1 (MQ=255)
                                                                      ggCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGc                                                                             <  1:203792/150‑1 (MQ=255)
                                                                         ccGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTa                                                                          >  2:1874960/1‑150 (MQ=255)
                                                                         ccGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTa                                                                          >  1:1132361/1‑150 (MQ=255)
                                                                           gCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATg                                                                        <  1:1378432/150‑1 (MQ=255)
                                                                               gCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCg                                                                    <  2:677076/150‑1 (MQ=255)
                                                                                 cGGGCTGGTGGCGATCTGCGCACTTTCCTATCTGATGCACCCGGTGGGTGAGCTCGCCTCC‑GGCCTGTTGG‑CGGGCGCCTTGTTTGTCTGCATCTTCATCGCCGCTCAAAATTGCTCGAAAATCCACGAAGTCCTGGGCTTATGGCCGtt                                                                  <  2:1303562/150‑1 (MQ=255)
                                                                                     cTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCAt                                                              <  2:1767911/150‑1 (MQ=255)
                                                                                     cTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCAt                                                              <  2:1685174/150‑1 (MQ=255)
                                                                                         tggCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCGACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTc                                                          >  2:1708554/1‑150 (MQ=255)
                                                                                          ggCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAAt                                                                                             <  2:208186/114‑1 (MQ=255)
                                                                                          ggCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAAt                                                                                             >  1:208186/1‑114 (MQ=255)
                                                                                          ggCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCt                                                         <  2:1825431/150‑1 (MQ=255)
                                                                                                  gcgcAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCg                                                 >  1:295188/1‑150 (MQ=255)
                                                                                                  gcgcAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCg                                                 >  1:868016/1‑150 (MQ=255)
                                                                                                   cgcAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGcat                                                <  2:836196/150‑3 (MQ=255)
                                                                                                    gcAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GG‑AGGGTGGACGAGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCgtg                                               >  2:267904/1‑150 (MQ=255)
                                                                                                        gTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTggg                                           <  1:1206022/150‑1 (MQ=255)
                                                                                                         ttCCGATCTGATGCACCCGGTGGGTGCGCCCGCCACCAGGCC‑GGTGG‑Cga                                                                                                                                              <  1:1088656/50‑2 (MQ=18)
                                                                                                         ttCCGATCTGATGCACCCGGTGGGTGCGCCCGCCACCAGGCC‑GGTGG‑Cga                                                                                                                                              >  2:1088656/1‑49 (MQ=18)
                                                                                                          tCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGt                                         <  2:519633/150‑1 (MQ=255)
                                                                                                             gATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGc                                                                                                     >  2:237017/1‑87 (MQ=255)
                                                                                                             gATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGc                                                                                                     <  1:237017/87‑1 (MQ=255)
                                                                                                               tCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCAt                                    >  1:1168840/1‑150 (MQ=255)
                                                                                                                cTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATc                                   <  1:403995/150‑1 (MQ=255)
                                                                                                                 tGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATcgac                                                                                         <  2:72017/95‑1 (MQ=255)
                                                                                                                 tGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATcgac                                                                                         >  1:72017/1‑95 (MQ=255)
                                                                                                                       aCCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCtgtg                            >  2:1826254/1‑150 (MQ=255)
                                                                                                                       aCCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCtgtg                            >  2:1664722/1‑150 (MQ=255)
                                                                                                                       aCCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCtgtg                            <  1:1874960/150‑1 (MQ=255)
                                                                                                                       aCCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCtgtg                            <  1:1675967/150‑1 (MQ=255)
                                                                                                                         ccGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGAGGGGTGGCATCGCCTTTGGc                          <  2:1168840/150‑1 (MQ=255)
                                                                                                                         ccGGTGGGTGCGATCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGc                          <  1:1340851/150‑1 (MQ=255)
                                                                                                                               ggtgCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTc                    >  2:102645/1‑150 (MQ=255)
                                                                                                                                 tgCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCgg                  >  1:1028647/1‑150 (MQ=255)
                                                                                                                                    gcTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCa               >  1:1530613/1‑150 (MQ=255)
                                                                                                                                      tCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAgg             >  2:422776/1‑150 (MQ=255)
                                                                                                                                      tCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAgg             >  2:1729640/1‑150 (MQ=255)
                                                                                                                                       cGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAGGt            <  2:1028647/150‑1 (MQ=255)
                                                                                                                                             c‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAGGTGGCGtt      <  1:1161559/150‑1 (MQ=255)
                                                                                                                                                  cTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAGGTGGCGTTGGGt  <  2:1362688/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GATGGCCATGGTGGGTGGCACCCTGTCAGCGTTGCTGGCCGGGCGCAACGACCCGGGCTTTCTGCATAACGGCCCGCTGGCCGGGCTGGTGGCGATTTGCGCAGGTTCCGATCTGATGCACCCGGTGGGTGCGCTCGCCACC‑GGCCTGGTGG‑CGGGGGCGCTGTTTGTCTGGACCTTCACCGCCGCGCAAAATCGCTGGAAAATCGACGACGTCCTGGGCGTATGGCCGTTGCATGGTCTGTGTGGCGTGTGGGGTGGCATCGCCTGTGGCGTGTTCGGCCAGGTGGCGTTGGGT  >  NC_002947/2404142‑2404436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑