Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,470,656 Δ1 bp 6.1% coding (178/1182 nt) PP_2165 → two‑component system response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,470,6560C. 6.1% 260.9 / 10.9 82coding (178/1182 nt)PP_2165two‑component system response regulator
Reads supporting (aligned to +/- strand):  ref base C (39/38);  new base . (3/2);  total (42/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01

ATCGATGACGACGACGTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCTCATCAAGCCGCTGGAA  >  NC_002947/2470509‑2470805
                                                                                                                                                    |                                                                                                                                                     
atcGATGACGACGACGTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCg                                                                                                                                                     >  1:420246/1‑150 (MQ=255)
   gATGACGACGACGTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAg                                                                                                                                                  >  2:819480/1‑150 (MQ=255)
       acgacgacgTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATgg                                                                                                                                              <  1:1341741/150‑1 (MQ=255)
       acgacgacgTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATgg                                                                                                                                              <  2:1820287/150‑1 (MQ=255)
         gacgacgTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggc                                                                                                                                            <  2:247332/150‑1 (MQ=255)
          acgacgTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcg                                                                                                                                           <  2:1383747/150‑1 (MQ=255)
               gTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTc                                                                                                                                      >  2:1759555/1‑150 (MQ=255)
                  gTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGaa                                                                                                                                   <  2:420246/150‑1 (MQ=255)
                   tCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAAc                                                                                                                                  >  1:470606/1‑150 (MQ=255)
                     cGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTg                                                                                                                                >  2:1395221/1‑150 (MQ=255)
                           aGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTTGGTTTCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgt                                                                                                                          >  1:1152524/1‑150 (MQ=255)
                           aGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgt                                                                                                                          >  1:384022/1‑150 (MQ=255)
                            gCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtc                                                                                                                         >  1:1778147/1‑150 (MQ=255)
                             ccTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtca                                                                                                                        <  2:1278544/150‑1 (MQ=255)
                             ccTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGAGCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtca                                                                                                                        >  1:536873/1‑150 (MQ=255)
                                  ccgccTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAAACCCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtcaggtca                                                                                                                   >  1:1060135/1‑150 (MQ=255)
                                        aTCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCagcgagc                                                                                                             <  1:208059/150‑1 (MQ=255)
                                         tCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcggc                                                                                                                                         <  1:1418038/121‑1 (MQ=255)
                                         tCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcggc                                                                                                                                         >  2:1418038/1‑121 (MQ=255)
                                         tCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtcaggtcag                                                                                                                  >  2:1276537/1‑144 (MQ=255)
                                         tCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCgtcaggtcag                                                                                                                  <  1:1276537/144‑1 (MQ=255)
                                              aaGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTgcgc                                                                                                       <  1:1395221/150‑1 (MQ=255)
                                                 aCAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGcgccgc                                                                                                    >  1:584065/1‑150 (MQ=255)
                                                 aCAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGcgccgc                                                                                                    >  1:700972/1‑150 (MQ=255)
                                                   aGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAg                                                                                                  <  1:1626529/150‑1 (MQ=255)
                                                       gTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGc                                                                                              >  1:1704912/1‑150 (MQ=255)
                                                        tttCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGcc                                                                                             >  1:579865/1‑150 (MQ=255)
                                                          tCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCgg                                                                                           <  1:1349819/150‑1 (MQ=255)
                                                                  ctccAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtg                                                                                   <  1:223185/150‑1 (MQ=255)
                                                                   tccAGGCCGGTAATGGCCAGCAGGGGCTTCAGATCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtgg                                                                                  >  2:1081797/1‑150 (MQ=255)
                                                                   tccAGGCCGGTAATGCCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCGCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGGGATCgtgg                                                                                  >  2:1714913/1‑150 (MQ=255)
                                                                    ccAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtggt                                                                                 <  2:718519/150‑1 (MQ=255)
                                                                    ccAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtggt                                                                                 <  1:737473/150‑1 (MQ=255)
                                                                      aGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcgg                                                                                                                                          <  2:1371983/91‑1 (MQ=255)
                                                                      aGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcgg                                                                                                                                          >  1:1371983/1‑91 (MQ=255)
                                                                      aGGCCGGTAATGGCCAGCAGGGGCTTCAGATCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGgtgt                                                                               <  1:1081797/150‑1 (MQ=255)
                                                                            gTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTg                                                                         <  2:384022/150‑1 (MQ=255)
                                                                               aTGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTgaga                                                                      >  1:408187/1‑147 (MQ=255)
                                                                                tGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCgg                                                                     <  1:819480/150‑1 (MQ=255)
                                                                                 ggCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGc                                                                    >  2:1576222/1‑150 (MQ=255)
                                                                                  gCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGaa                                                                                                                                   >  2:981522/1‑86 (MQ=255)
                                                                                  gCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGaa                                                                                                                                   <  1:981522/86‑1 (MQ=255)
                                                                                  gCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGCGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCg                                                                   >  2:323954/1‑150 (MQ=255)
                                                                                    cagcagGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATcc                                                                                                                            <  2:436942/91‑1 (MQ=255)
                                                                                    cagcagGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATcc                                                                                                                            >  1:436942/1‑91 (MQ=255)
                                                                                            gCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGa                                                         >  1:1753408/1‑150 (MQ=255)
                                                                                              ttCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcg                                                                                                                                           <  1:752152/66‑1 (MQ=255)
                                                                                              ttCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGggcg                                                                                                                                           >  2:752152/1‑66 (MQ=255)
                                                                                              ttCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATc                                                                                      >  1:124741/1‑119 (MQ=255)
                                                                                              ttCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATc                                                                                      <  2:124741/119‑1 (MQ=255)
                                                                                              ttCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATg                                                       <  1:368959/150‑1 (MQ=255)
                                                                                                  ggTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGt                                                   <  2:700972/150‑1 (MQ=255)
                                                                                                      ttCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCTGGTGTCGGCGTCATGAGTGATGCGGTGGaa                                               >  1:397525/1‑150 (MQ=255)
                                                                                                      ttCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGaa                                               >  1:733913/1‑150 (MQ=255)
                                                                                                       tCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtg                                                                                   >  1:1311924/1‑113 (MQ=255)
                                                                                                       tCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCgtg                                                                                   <  2:1311924/113‑1 (MQ=255)
                                                                                                       tCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAg                                              >  2:1777846/1‑150 (MQ=255)
                                                                                                       ccGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAg                                              <  2:429636/149‑1 (MQ=255)
                                                                                                         gaagaaCACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTg                                                  >  2:1407509/1‑144 (MQ=255)
                                                                                                         gaagaaCACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTg                                                  <  1:1407509/144‑1 (MQ=255)
                                                                                                         gaagaaCACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCg                                            >  2:692749/1‑150 (MQ=255)
                                                                                                          aagaaCACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTTCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCgg                                           >  1:386814/1‑149 (MQ=255)
                                                                                                             aaCACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTgc                                        <  2:584065/150‑1 (MQ=255)
                                                                                                               cacCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTgcgc                                      <  1:1576222/150‑1 (MQ=255)
                                                                                                                  cAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTg                                   >  2:450452/1‑150 (MQ=255)
                                                                                                                  cAGACCGACCGCGTGATTTGTCATCTGCGCATGCCTCAGATGGCCGGCCTCGATCTCCTCCGTCAGGTCAGCGAGCGTGCGCCTCAGTTGCTGGTGATCGTGGTGTCCGGTGCCGCCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTg                                   <  2:420601/150‑1 (MQ=255)
                                                                                                                   aGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTAAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTgg                                  <  1:1759555/150‑1 (MQ=255)
                                                                                                                     cccGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGgc                                <  2:1420835/150‑1 (MQ=255)
                                                                                                                        gACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGcgcc                             >  1:1919480/1‑150 (MQ=255)
                                                                                                                         aCCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGcgccg                            >  2:1733698/1‑150 (MQ=255)
                                                                                                                              gTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGAc                       <  2:733913/150‑1 (MQ=255)
                                                                                                                                    tgcgatctgcgCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGGGGGAGCGTTGCGCCTGGACGCCGCCGACTACCta                 >  2:481732/1‑149 (MQ=255)
                                                                                                                                    tgcgatctgcgCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTAGTGCGGTGGAAGGGTTGCGCCTGGGCGCCGCCGACTACCtc                 >  1:1563556/1‑150 (MQ=255)
                                                                                                                                      ccatctgcgGCATGCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcat               >  1:1364646/3‑150 (MQ=255)
                                                                                                                                      ccatctgcgGCATGCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcat               >  2:1820614/3‑150 (MQ=255)
                                                                                                                                      ccatctgcgGCATGCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcat               >  1:1364622/3‑150 (MQ=255)
                                                                                                                                       gatctgcgCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcatc              <  2:1575799/150‑1 (MQ=255)
                                                                                                                                       catctgcgGCATGCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcatc              <  2:1364622/149‑1 (MQ=255)
                                                                                                                                       catctgcgGCATGCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCtcatc              <  2:1364646/149‑1 (MQ=255)
                                                                                                                                         tctgcgCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCTCATCaa            <  1:1733698/150‑1 (MQ=255)
                                                                                                                                           tgcgCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCTCATCAAGc          <  1:910994/150‑1 (MQ=255)
                                                                                                                                                 aTGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCACCGACTACCTCATCAAGCCGCTg     <  1:444024/150‑1 (MQ=255)
                                                                                                                                                    ccGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGCCTACCTCATCAAGCCGCTGGaa  <  2:356676/150‑1 (MQ=255)
                                                                                                                                                    ccGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCTCATCAAGCCCCTGTaa  <  2:470606/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ATCGATGACGACGACGTGGTCCGTGCCAGCCTCGCCGCCTATCTTGAAGACAGTGGTTTCAGCGTCCTCCAGGCCGGTAATGGCCAGCAGGGGCTTCAGGTCTTCGAAGAACACCAGCCCGACCTCGTGATCTGCGATCTGCGCATGCCGCAGATGGGCGGCCTCGAACTGATCCGTCAGGTCAGCGAGCGTGCGCCGCAGTTGCCGGTGATCGTGGTGTCCGGTGCCGGCGTCATGAGTGATGCGGTGGAAGCGTTGCGCCTGGGCGCCGCCGACTACCTCATCAAGCCGCTGGAA  >  NC_002947/2470509‑2470805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: