| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,151,986 | Δ1 bp | 5.7% | intergenic (+132/+19) | PP_3655 → / ← PP_3656 | cytosine/purine/uracil/thiamine/allantoin permease family protein/aromatic compound‑specific porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,151,986 | 0 | G | . | 5.7% | 224.4 / 6.9 | 70 | intergenic (+132/+19) | PP_3655/PP_3656 | cytosine/purine/uracil/thiamine/allantoin permease family protein/aromatic compound‑specific porin |
| Reads supporting (aligned to +/- strand): ref base G (29/37); new base . (2/2); total (31/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
GCAGCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCACTCTGAATAACA > NC_002947/4151840‑4152128 | gCAGCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggcc > 2:1750412/1‑150 (MQ=255)gCAGCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggcc < 1:7067/150‑1 (MQ=255) gCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGACTATTTGGCGAAAAATGGGCCGG‑CTTCAGAAggccggc < 1:1095737/150‑1 (MQ=255) gCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATACATGGCGAAAAATGGGCCGG‑CTTCAGAAggccggc < 2:421283/150‑1 (MQ=255) gCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggccggc < 1:955394/150‑1 (MQ=255) aTGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCg > 1:483439/1‑150 (MQ=255) tGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGGCCTTCTGAA‑GCCGGcccat < 1:1616518/150‑3 (MQ=255) tGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGt > 2:1213551/1‑150 (MQ=255) ttAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCg > 2:91497/1‑150 (MQ=255) tAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGGACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGc > 2:1292263/1‑150 (MQ=255) ggTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTAttt < 2:143199/150‑1 (MQ=255) cTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑ATTCAGAAGGCCGGCCCGTTTCGCTATTTAGaa < 2:1069644/150‑1 (MQ=255) ggCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGt < 1:91497/150‑1 (MQ=255) gCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGtt > 1:108874/1‑150 (MQ=255) ccTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTg > 1:1275972/1‑150 (MQ=255) ttCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAg < 1:627570/150‑1 (MQ=255) gTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGgtg > 1:1437327/1‑150 (MQ=255) gCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAg < 1:1213551/150‑1 (MQ=255) cAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAg > 2:48189/1‑134 (MQ=255) cAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAg < 1:48189/134‑1 (MQ=255) aaaaGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAgcg > 2:777925/1‑150 (MQ=255) aaaaGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAgcg > 2:1616900/1‑150 (MQ=255) aagaagAAACGGCTGGGTGCAGGCGTCCGTACGCCTGCTGCAATTCAGGCGGAAAACAGCGAACCCTTCTATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCa < 1:1251788/150‑1 (MQ=255) aTGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGa > 2:194994/1‑150 (MQ=255) aaCGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGTCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAg < 2:1112603/150‑1 (MQ=255) aaCGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAg > 2:1706871/1‑150 (MQ=255) aaCGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAg < 2:293482/150‑1 (MQ=255) cTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGAt < 1:777925/150‑1 (MQ=255) cTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTAGATTTGGCATAAATGGGTGAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGAt < 1:1175804/150‑1 (MQ=255) gggTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGAttt < 2:1234659/150‑1 (MQ=255) ggTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCAAtttt < 2:24074/150‑1 (MQ=255) tGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAg > 1:970931/1‑140 (MQ=255) tGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAg < 2:970931/140‑1 (MQ=255) accAGGCGTTCGGACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCa > 1:371217/3‑150 (MQ=255) gCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCAt < 2:1436012/150‑1 (MQ=255) aGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTa > 2:1212049/1‑150 (MQ=255) ggCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggcc > 2:211770/1‑91 (MQ=255) ggCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggcc < 1:211770/91‑1 (MQ=255) gCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAgg > 1:1185022/1‑136 (MQ=255) gCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAgg < 2:1185022/136‑1 (MQ=255) gCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCg < 2:371217/150‑1 (MQ=255) gCCTGGTGCAATTCAGGCGGAAAAAAGCGAACCCTTCGAATGGGAATAAATGGCAAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCg < 2:670111/150‑1 (MQ=255) ccTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGt > 2:675752/1‑150 (MQ=255) cTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTa < 1:1192858/150‑1 (MQ=255) cTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTa < 2:1164341/150‑1 (MQ=255) tGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAg < 2:429749/102‑1 (MQ=255) tGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAg > 1:429749/1‑102 (MQ=255) tGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTc < 1:1750412/150‑1 (MQ=255) aTTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGc < 2:1148564/150‑1 (MQ=255) aTTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGc > 1:1598237/1‑150 (MQ=255) ttCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggccggc < 2:68240/72‑1 (MQ=255) ttCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAggccggc > 1:68240/1‑72 (MQ=255) aGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAAAAGGCAGG‑CTGCAGAAGGCCGGCCCGGGTCGCTATATAGAAGTCGAAGGCGTGGCGCATGATCAGGCGATTTTCATTAGCGGTATCAGCGTAGATCGaaagatc > 2:926761/1‑144 (MQ=255) gCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCt < 1:106483/127‑1 (MQ=255) gCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCt > 2:106483/1‑127 (MQ=255) ggAAAACAGCGATCCCTTCGATTGGGAATAACTGGCGAAAAATGGGCCGG‑CTTCAGATGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGAGCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTg < 2:669657/150‑1 (MQ=255) aaaaCAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGa < 1:276609/150‑1 (MQ=255) aaaaCAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGa < 2:1664105/150‑1 (MQ=255) cAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAgcg > 2:333030/1‑117 (MQ=255) cAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAgcg < 1:333030/117‑1 (MQ=255) aaCCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTGCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCa < 1:573319/150‑1 (MQ=255) cTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTga > 1:1165621/1‑150 (MQ=255) ttCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGt < 2:1122784/111‑1 (MQ=255) ttCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGt > 1:1122784/1‑111 (MQ=255) ttCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaa > 2:884158/1‑150 (MQ=255) tGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaaacgaaa < 1:884158/150‑1 (MQ=255) ggAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGGGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAaca < 2:629402/150‑1 (MQ=255) gAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGa < 2:1275972/150‑1 (MQ=255) gaaacgggCCGGCCTTCCGAA‑GCCGGCCCATTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGAcc > 1:1595808/6‑150 (MQ=255) tGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGCTACGACGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCActc < 1:1572716/150‑1 (MQ=255) ggccggccTTCTGAA‑GCCGGCCCGTTTCGCTATTTAGAAGTTGa > 1:882414/1‑44 (MQ=14) ggccggccTTCTGAA‑GCCGGCCCGTTTCGCTATTTAGAAGTTGa < 2:882414/44‑1 (MQ=14) ccGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCACTCTGaa > 1:189621/1‑150 (MQ=255) cTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGATCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCACTCTGAATAAc < 1:1212049/150‑1 (MQ=255) ttCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCACTCTGAATAACa > 2:401887/1‑150 (MQ=255) gAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaaacgaaa < 2:509622/117‑1 (MQ=255) gAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaaacgaaa > 1:509622/1‑117 (MQ=255) aaGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaaacgaaa > 2:1386377/1‑116 (MQ=255) aaGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTgaaacgaaa < 1:1386377/116‑1 (MQ=255) | GCAGCGATGGCTTAATCGGTACTGGCCTTTCGTTGCAAAAGATGAAACGGCTGGGTGCAGGCGTCCGAACGCCTGGTGCAATTCAGGCGGAAAACAGCGAACCCTTCGATTGGGAATAAATGGCGAAAAATGGGCCGG‑CTTCAGAAGGCCGGCCCGTTTCGCTATTTAGAAGTTGAAGGTGTAGCGCATGATCAGGCGATTTTCATTAGCGCTGTCAGCGTAGGTCGAGCGGTTCGTGGAGTTACGCCACTGAAACGAAACACCCTTCGCCGGACCACTCTGAATAACA > NC_002947/4151840‑4152128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |