| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,188,018 | Δ1 bp | 7.9% | intergenic (+79/‑131) | PP_3683 → / → PP_3684 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,188,018 | 0 | T | . | 7.9% | 218.2 / 13.9 | 76 | intergenic (+79/‑131) | PP_3683/PP_3684 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (37/29); new base . (2/4); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.10e-01 | |||||||||||
TCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGT > NC_002947/4187870‑4188166 | tCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTa > 2:1718981/1‑150 (MQ=255) cTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTaa < 2:271220/150‑1 (MQ=255) ttggttgATGCCTCATCGGTAGCTGCCGATCACGATGTCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCGGGCGGGGGCGGGTGGCGTGGACCAAGCCGCTT‑GCTAAGCGGcg > 1:1715440/1‑149 (MQ=255) ggttgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCTTg < 2:1106139/150‑1 (MQ=255) gttgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTgg < 2:1266426/150‑1 (MQ=255) ccTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAAc < 1:1075436/150‑1 (MQ=255) ccTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAAc > 1:1386348/1‑150 (MQ=255) tCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTATCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 2:1093728/1‑150 (MQ=255) tCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGAAAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 1:1675076/1‑150 (MQ=255) cATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACggg > 1:838546/1‑150 (MQ=255) aTCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTGCCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGc < 1:128389/150‑1 (MQ=255) aTCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGc > 1:1302476/1‑150 (MQ=255) tCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCt < 2:1867067/150‑1 (MQ=255) ggTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCttt < 2:1292108/150‑1 (MQ=255) gTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTc > 1:182390/1‑150 (MQ=255) tAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCa > 2:1674323/1‑150 (MQ=255) gCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGCACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTc < 2:980641/150‑1 (MQ=255) gCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCtt > 1:1150355/1‑142 (MQ=255) gCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCtt < 2:1150355/142‑1 (MQ=255) gATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGACGCGTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGGCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTcgcg > 1:365806/1‑150 (MQ=255) aCGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTc > 1:1606533/1‑150 (MQ=255) gATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCg > 2:1879572/1‑150 (MQ=255) cAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCTTggttcac > 2:552962/1‑115 (MQ=39) cAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCTTggttcac < 1:552962/120‑6 (MQ=39) ggATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCt < 1:688130/109‑1 (MQ=255) ggATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑AGCAAGCGGCt > 2:688130/1‑109 (MQ=255) aTGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGGACTAACGGGCTTGCATCCTCGCGCCTCCGGCCAAGGCCt > 1:1865589/1‑150 (MQ=255) aGACAAGCCGTCCTAGAAGTCGCTTTCTCAGCTCTCGGCGTTCCCTAATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTAATATTCACGTCTCCGGCTAAGGCCTgcgc > 2:904823/1‑150 (MQ=255) gACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCtt < 1:1157994/103‑1 (MQ=255) gACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑AGCAAGCGGCtt > 2:1157994/1‑103 (MQ=255) aCAAGCCGTCCTAGCAGTCGATTTATCAGATATCGGCGTTAGCGCCTGAACGACGACATGCGTTGCCGGCTGGCTTTAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTgcgcgc < 2:1453668/150‑1 (MQ=255) aaGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTc > 2:310178/1‑150 (MQ=255) aGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTcc > 1:413793/1‑150 (MQ=255) gCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCg < 1:1328994/150‑1 (MQ=255) ccGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGc > 1:480785/1‑150 (MQ=255) tCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTg > 1:734523/1‑150 (MQ=255) gCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCaaa < 1:1879572/150‑1 (MQ=255) cAGTCGCTTTCTCAGCGCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAAt < 1:158441/150‑1 (MQ=255) cAGTCGCTTTCTCAGCGCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCGAAGTGTTTGGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAAt < 2:456146/150‑1 (MQ=255) gCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCACCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCaaaa > 1:625755/1‑150 (MQ=255) cTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAg < 2:480785/150‑1 (MQ=255) tctcAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTc < 2:1606533/150‑1 (MQ=255) tctcAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGACCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTc < 2:1158422/150‑1 (MQ=255) tcAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCaa < 2:935378/114‑1 (MQ=255) tcAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCaa > 1:935378/1‑114 (MQ=255) gCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCAtctc < 2:413793/150‑1 (MQ=255) gCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCAtctc > 2:1342635/1‑150 (MQ=255) ctctCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATctct > 2:1782008/1‑150 (MQ=255) tctcGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTa > 2:435883/1‑150 (MQ=255) cGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGAt < 1:360414/150‑1 (MQ=255) cTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAg > 1:6019/1‑150 (MQ=255) cATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGc > 2:1368832/1‑71 (MQ=255) cATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGc < 1:1368832/71‑1 (MQ=255) aTGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg < 2:1373156/68‑1 (MQ=255) aTGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 1:1373156/1‑68 (MQ=255) ggCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACaa < 2:1061413/150‑1 (MQ=255) cccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCg > 2:89126/1‑150 (MQ=255) cccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCg > 1:467844/1‑150 (MQ=255) tGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACgtgt < 2:752356/145‑1 (MQ=255) tGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACgtgt > 1:752356/1‑145 (MQ=255) cGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGc < 1:310178/150‑1 (MQ=255) ggggCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCACATCACTAGATAGCTCCAAGTACAGCGTGTCGCTTCGcc > 2:1545288/1‑150 (MQ=255) ggCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTc < 1:1864924/150‑1 (MQ=255) gCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTcc > 2:1110704/1‑150 (MQ=255) cTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCa < 2:838546/150‑1 (MQ=255) gAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCCAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTg > 1:498860/1‑150 (MQ=255) aaCCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTgc < 2:1715440/150‑1 (MQ=255) ccAAGCCGCTT‑AGCAAGCGGCTTGGTCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTTTCGCTCCGCCTCCAATCAAGCCTTacgc > 2:956647/1‑150 (MQ=255) cAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCt > 2:481000/1‑150 (MQ=255) aaGCCGCTTAGC‑AAGCGGCTTGGTCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTg > 1:738234/1‑150 (MQ=255) aaGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTg > 2:1458500/1‑150 (MQ=255) cGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGtttt > 2:710801/1‑150 (MQ=255) t‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTcgc < 1:1110704/150‑1 (MQ=255) cTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGt < 1:1545288/150‑1 (MQ=255) cTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGt < 1:1093728/150‑1 (MQ=255) cTAAGCGGCTTGGCCCTAACGGGCTTTCATCCGCGCGCCTCCGGCCAAGGCCTGAGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAACCTTGCGCTGTTTTTCGCGt > 2:805816/1‑150 (MQ=255) | TCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGT > NC_002947/4187870‑4188166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |