| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 342,831:1 | +A | 6.8% | coding (1345/1386 nt) | gabP‑I → | gamma‑aminobutyrate permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 342,831 | 1 | . | A | 6.8% | 341.1 / 17.4 | 88 | coding (1345/1386 nt) | gabP‑I | gamma‑aminobutyrate permease |
| Reads supporting (aligned to +/- strand): ref base . (41/41); new base A (3/3); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
TGTGGCTGTTCCCGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCG > NC_002947/342682‑342980 | tgtgGCTGTTCCCGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCAcc < 1:811083/150‑1 (MQ=255)tgtgGCTGTTCCCGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACCGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCAcc < 1:457558/150‑1 (MQ=255) tGTTCCCGGGCCTGACCCGGGCGACCATTGCCTTCCTCGTTGCCTTTCTGGTGGTCAGGGCGCTGCGTGAGGATCACCGTGCGGGGTTCATTGCGACTGCGCTGTGGAGTATTGGTGTGGTGGCGGCTGGGTGGC‑GGTGCACCAGCAAgc < 2:853679/150‑1 (MQ=255) cccGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGa > 2:145682/1‑150 (MQ=255) cccGGGCCTGACCTGGGCGACAATGGCCTTCGTCGGTGCCATTCTGGTGGTCATGGCGCTGAGTGTGAGCGAGCCGGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGa < 1:1278798/150‑1 (MQ=255) cccGGGCCTGAACTGGGAGACCATTGCCTTCATTGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGa < 1:510720/150‑1 (MQ=255) ccGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGATTCCTCTCCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAg < 1:1180957/150‑1 (MQ=255) ccGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAg < 2:129465/150‑1 (MQ=255) cGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAgg > 1:805397/1‑150 (MQ=255) ggCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCt < 2:1749178/150‑1 (MQ=255) cTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGcc < 1:539313/150‑1 (MQ=255) gACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCcgg > 2:725514/1‑150 (MQ=255) cTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCcgggcg > 2:1533531/1‑150 (MQ=255) cTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCcgggcg < 1:1547073/150‑1 (MQ=255) gCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGggcgggcg > 1:284692/1‑150 (MQ=255) cATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCTGGCGGGCGGCGCt > 1:1131682/1‑150 (MQ=255) aTTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTg < 2:1269248/150‑1 (MQ=255) ttGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTAGTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTgg > 2:1657380/1‑150 (MQ=255) ccTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACa > 1:1918128/1‑150 (MQ=255) cTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGgcgccttgatg < 2:292506/150‑8 (MQ=255) cTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAg > 1:394737/1‑150 (MQ=255) cTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAg > 1:394971/1‑150 (MQ=255) aTCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑ACAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGa > 2:1177861/1‑150 (MQ=255) gTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCg < 1:725514/150‑1 (MQ=255) gTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCg > 2:281385/1‑150 (MQ=255) cATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgct > 2:11282/1‑150 (MQ=255) cATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgct > 1:1690971/1‑150 (MQ=255) ttCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGGCAAATCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgctgg > 1:575881/1‑150 (MQ=255) ttCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgctgg < 2:1915034/150‑1 (MQ=255) ttCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgctgg > 1:1523421/1‑150 (MQ=255) ttCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgctgg < 2:228013/150‑1 (MQ=255) ttCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCgctgg > 2:1870726/1‑150 (MQ=255) tCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGCGAGCGCGGCGCTGGACAGCTGATCGGCgctggc < 1:50004/150‑1 (MQ=255) tggtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGaaa < 1:500689/150‑1 (MQ=255) tggtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGaaa < 2:1045491/150‑1 (MQ=255) tggtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑ACAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGaaa < 1:1177861/150‑1 (MQ=255) ggtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAAt > 2:301025/1‑150 (MQ=255) gtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTg < 1:830553/123‑1 (MQ=255) gtCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTg > 2:830553/1‑123 (MQ=255) aTGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATgaga > 1:486661/1‑150 (MQ=255) ggCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGTGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAg > 2:1215049/1‑150 (MQ=255) ggCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGgc < 2:89946/132‑1 (MQ=255) ggCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGgc > 1:89946/1‑132 (MQ=255) aCCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAgg < 1:281385/150‑1 (MQ=255) ccGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAggg < 2:1617143/150‑1 (MQ=255) cGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAA‑GGTGCGGc < 2:862861/150‑1 (MQ=255) gagaTCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGcc > 2:1237475/1‑150 (MQ=255) tCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGc < 2:277753/142‑1 (MQ=255) tCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGc > 1:277753/1‑142 (MQ=255) ttGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt < 2:1523421/150‑1 (MQ=255) ttGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt < 1:1870726/150‑1 (MQ=255) gCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTtgt < 1:1744534/150‑1 (MQ=255) gCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTtgt < 1:301025/150‑1 (MQ=255) tGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAGGCGCGAGGCTGCAGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGACTAGTTTTGTGGCCt > 2:1051798/1‑150 (MQ=255) tGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAGAGCGTCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCt > 1:1039995/1‑150 (MQ=255) tGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGC‑GGTGCACCAGCAAgc < 1:791818/53‑1 (MQ=25) tGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGC‑GGTGCACCAGCAAgc > 2:791818/1‑53 (MQ=25) gctgctGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCtgtg > 1:227577/1‑150 (MQ=255) ctgctgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGa < 2:284692/150‑1 (MQ=255) tgctgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGAt > 2:380291/1‑150 (MQ=255) tgctgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGAt < 1:1207993/150‑1 (MQ=255) tgctgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGAt > 1:720000/1‑150 (MQ=255) ggctgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGAt > 1:1715046/2‑150 (MQ=255) tgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGc < 2:486661/150‑1 (MQ=255) tgAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGc < 1:1753087/150‑1 (MQ=255) aGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGccc > 1:767914/1‑150 (MQ=255) tATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCtt > 2:1597230/1‑150 (MQ=255) gtgtggtgGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTcgcg > 1:1508975/1‑150 (MQ=255) gtgtggtgGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTcgcg < 1:1533531/150‑1 (MQ=255) gtggtgGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCggg < 2:767914/150‑1 (MQ=255) gggggcggcTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGAGCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCa < 1:321538/147‑1 (MQ=255) gtggCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCaa < 1:879917/150‑1 (MQ=255) gtggCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTCGCAGCTCCAGTCACGCCGCTCGCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCaa > 1:432064/1‑150 (MQ=255) ggctggctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt > 1:968286/1‑116 (MQ=255) ggctggctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt < 2:968286/116‑1 (MQ=255) ggctggctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCg > 2:1701694/1‑150 (MQ=255) ctcgcgctTGC‑GGTGCACCAGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCg > 1:2600/6‑150 (MQ=255) tcgcgctTGC‑GGTGCACCAGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt > 2:1142992/5‑115 (MQ=255) tcgcgctTGC‑GGTGCACCAGCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCttttttt < 1:1142992/111‑1 (MQ=255) gggctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGCCCCTTTCGCGGGCAAGCCCGCAg < 2:948057/149‑1 (MQ=255) gctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGACCGGTGCAGCCGGTTTTTGTGGACTCGGATGGCCCTTTCGCGGGCAAGCCCGCAGGt > 2:989544/1‑150 (MQ=255) gctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCTTGCCCGcgaaa < 1:1657380/150‑5 (MQ=255) gctTGCTGGGGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGt > 2:1820144/1‑150 (MQ=255) ctTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCGGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCGTTCGCGGGCAAGCCCGCAGGtt > 1:400015/1‑150 (MQ=255) ttGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCTGGCTGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTc < 1:1277312/150‑1 (MQ=255) gaggTGCACC‑ACAAGCGAGAGGGTGATGGGCGGCCGGAGCATGACAGCTGATCGCCGCTTGATGAAATGAGAAGGCCGCGCTCTGTGAAGGGTGCGGCTTTTTTTTGTGCCCTGTGATGGCCCTTTCGCGGGCCAGCCCGCAGGTTcccc < 2:1039995/148‑1 (MQ=255) tGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTcacca < 1:352407/150‑1 (MQ=255) gTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACcaca < 2:1690971/150‑1 (MQ=255) tGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAg > 1:682522/1‑150 (MQ=255) aCC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGcc > 2:918290/1‑150 (MQ=255) c‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCg > 2:1766878/1‑150 (MQ=255) c‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCg > 1:825538/1‑150 (MQ=255) c‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCg > 1:69589/1‑150 (MQ=255) | TGTGGCTGTTCCCGGGCCTGACCTGGGCGACCATTGCCTTCATCGTTGCCATTCTGGTGGTCATGGCGCTGCGTGAGGATCACCGTGCGGAGATCATTGCGACTGCGCTGCTGAGTATTGGTGTGGTGGCGGCTGGCTTGCTGGTGCACC‑GCAAGCGCGAGGCTGCCGGGCGGGCGGCGCTGGACAGCTGATCGGCGCTGGCTGAAATGAGAAGGCCGCGCCCTGTGAAGGGTGCGGCCTTTTTTTGTGGCCTGTGATGGCCCTTTCGCGGGCAAGCCCGCAGGTTCACCACAGGCCCG > NC_002947/342682‑342980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |