| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,763,023:1 | +A | 5.0% | coding (931/1020 nt) | PP_2417 ← | iron ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,763,023 | 1 | . | A | 5.0% | 325.4 / 10.0 | 80 | coding (931/1020 nt) | PP_2417 | iron ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base . (35/41); new base A (2/2); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 | |||||||||||
AGTTGCAGCCCCAGCCCATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGA > NC_002947/2762876‑2763172 | aGTTGCAGCCCCAGCCCATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑gg < 1:186833/150‑1 (MQ=255) cagccccagcccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATc < 1:1621076/150‑1 (MQ=255) agccccagcccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCa > 1:143229/1‑150 (MQ=255) agccccagcccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACC‑GGCCAGGTGATcc < 2:1828221/150‑2 (MQ=255) ccccagcccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGc < 2:1675475/150‑1 (MQ=255) ccagcccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGt > 1:1158477/1‑150 (MQ=255) ccATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCGCCCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTgcgc < 2:1326364/150‑1 (MQ=255) cATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGa > 2:1628167/1‑150 (MQ=255) aTGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGaa > 2:540912/1‑150 (MQ=255) tGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCT‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGaaa < 2:742881/150‑1 (MQ=255) tGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGaaa < 2:1248680/150‑1 (MQ=255) gCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGa > 2:373946/1‑150 (MQ=255) cAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGaa < 2:571920/150‑1 (MQ=255) aGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGaacgtaa < 1:1006435/150‑6 (MQ=255) ccAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTc < 2:1324227/150‑1 (MQ=255) ccAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTc < 2:143229/150‑1 (MQ=255) aGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTg < 2:280487/150‑1 (MQ=255) ggAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCca < 2:1442119/150‑1 (MQ=255) ggATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAAt < 2:1649408/150‑1 (MQ=255) cGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGGGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAACGACTGTCTGCCACAATCAGGa > 2:70494/1‑150 (MQ=255) aaCAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAAc > 1:1127693/1‑150 (MQ=255) aCAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCCGCACCGGG‑T‑CACCCGCCT‑GTAAAGCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACa < 2:1005587/150‑1 (MQ=255) aCAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACa > 2:637109/1‑150 (MQ=255) ccATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACTGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCTCAATCAGGAGCAGCGCAcc < 2:256310/150‑1 (MQ=255) cATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCg > 2:362236/1‑150 (MQ=255) tGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACa < 1:1323330/140‑1 (MQ=255) tGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACa > 2:1323330/1‑140 (MQ=255) ggCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGccc > 1:31888/1‑150 (MQ=255) aTGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTgcgc > 1:948795/1‑150 (MQ=255) cg‑cCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGAGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCg < 1:1349719/150‑1 (MQ=255) g‑cCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGc < 1:1567082/112‑1 (MQ=255) g‑cCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGc > 2:1567082/1‑112 (MQ=255) ccGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGa > 2:37952/1‑100 (MQ=255) ccGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCaa > 1:137724/1‑150 (MQ=255) ccGACGGCTGACCAGAATCAGTGCGAACACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGa < 1:37952/100‑1 (MQ=255) tGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGc < 2:1266508/150‑1 (MQ=255) gACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCt < 2:411346/150‑1 (MQ=255) aCCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCtg > 2:1487702/1‑150 (MQ=255) aCCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCtg > 1:1817489/1‑150 (MQ=255) cAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGTTCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCtgtg > 1:17456/1‑150 (MQ=255) cAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCtgtg > 1:209333/1‑150 (MQ=255) aGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGc < 2:1127693/150‑1 (MQ=255) aGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGc < 2:686705/150‑1 (MQ=255) aGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCgggg < 1:953500/150‑1 (MQ=255) aGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCgggg < 1:637109/150‑1 (MQ=255) tGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCCTCACCGAAGTCCAGTTGG‑‑‑TTTTATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGcc < 2:528090/150‑1 (MQ=255) cGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGCGCCCGGGGCCGa > 1:1240509/1‑150 (MQ=255) gAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAg > 1:401517/1‑150 (MQ=255) gAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAg > 1:1543606/1‑150 (MQ=255) gggggCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGAC‑CGAGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAg < 1:1057263/150‑1 (MQ=255) gggCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGgc < 1:540912/150‑1 (MQ=255) cACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCa > 1:1728105/1‑150 (MQ=255) ccGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAg < 2:401517/150‑1 (MQ=255) cGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAgg > 2:1659222/1‑150 (MQ=255) gATGAGCGCCTTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGc < 1:320565/150‑1 (MQ=255) gATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGc < 1:1889355/150‑1 (MQ=255) tCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCAt < 2:1059837/150‑1 (MQ=255) gcgcCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATggg < 1:30144/150‑1 (MQ=255) gcgcCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGGTATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGCGCAGAAGGCGCAAGGCATggg > 1:151042/1‑150 (MQ=255) ggcggTAACCACGCA‑CACTGGCAC‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATgggg < 2:1543606/146‑1 (MQ=255) cgcCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATgggg < 2:1898811/150‑1 (MQ=255) ccGTAACCACGCC‑CACCGGGCT‑CAACTGGTG‑GGTGATCAGCGTGCGCTAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGa < 2:17456/150‑1 (MQ=255) cGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGc > 1:1666831/1‑115 (MQ=255) cGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGc < 2:1666831/115‑1 (MQ=255) tAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATaa > 2:7544/1‑150 (MQ=255) ccACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCa > 1:675675/1‑150 (MQ=255) cACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAg > 1:1149919/1‑150 (MQ=255) cACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAg > 2:1415269/1‑150 (MQ=255) cACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAg > 1:837842/1‑150 (MQ=255) gCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGccc < 1:373946/150‑1 (MQ=255) c‑cACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGa > 2:1840158/1‑150 (MQ=255) c‑cACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGa > 2:1550894/1‑150 (MQ=255) gctgAT‑CACC‑GGCCAGGTGATCCGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGAACAAACAGCAAGACata > 2:1356178/4‑148 (MQ=255) gctgAT‑CACC‑GGCCAGGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACaaa > 1:651584/4‑150 (MQ=255) tgAT‑CACC‑GGCCAGGTGATCCGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAAc < 1:1356178/149‑1 (MQ=255) gAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTTCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAAcc > 2:1862029/1‑150 (MQ=255) t‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGa > 2:82394/1‑150 (MQ=255) cACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGAt < 2:137724/150‑1 (MQ=255) cACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGAt < 2:1921504/150‑1 (MQ=255) aCCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATg < 1:1659222/150‑1 (MQ=255) gCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGcc < 2:837842/150‑1 (MQ=255) c‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCTCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGa > 1:1477073/1‑150 (MQ=255) | AGTTGCAGCCCCAGCCCATGGCAGGCCAGCGGAGGGATGCGAACAGCTGCCATGGCGGTCATGGGCG‑CCCCCGACGGCTGACCAGAATCAGTGCGAATACGGGGGCACCGATCAGCGCCGTAACCACGCC‑CACCGGGAT‑CACCTGGCC‑GGTGATCAGCGTGCGCGAAAGAATGTCTGCCACAATCAGGAACAGCGCACCGCCCAGTGCGCTGGCGGGCAACAGACGGCTGTGCCCGGGGCCGAGCAGAAGGCGCAAGGCATGGGGGATAACCAGCCCGACAAAACCGATGGCGCCGA > NC_002947/2762876‑2763172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |