| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,050,084:1 | +C | 8.2% | intergenic (+13/‑128) | PP_2662 → / → PP_2663 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,050,084 | 1 | . | C | 8.2% | 278.2 / 19.7 | 73 | intergenic (+13/‑128) | PP_2662/PP_2663 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (35/32); new base C (3/3); total (38/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01 | |||||||||||
TGGCGCTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAACGA > NC_002947/3049935‑3050231 | tgGCGCTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCg > 1:984108/1‑150 (MQ=255) gcgcTGTTCCATGACATCAACGACAGCGGGAAACTGGTGGCCGAGTACAACCAGGTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTAACCTGGTAAGCGGCCGGGGCCG‑Ct > 1:731020/1‑150 (MQ=255) gcTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGTGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAg > 1:865220/1‑150 (MQ=255) gcTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAg > 2:888761/1‑150 (MQ=255) gTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAggcg > 1:1787670/1‑150 (MQ=255) aTCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATg > 2:947606/1‑150 (MQ=255) tCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGa > 1:1332563/1‑150 (MQ=255) cAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACAGCAGTGCGCAGAACGAAGACACCGAGGCCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGac > 1:707002/1‑150 (MQ=255) aaCGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGaca > 1:1178431/1‑150 (MQ=255) aaCGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGaca > 2:1405647/1‑150 (MQ=255) tggtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGTGGCCG‑CTa > 1:502465/1‑117 (MQ=255) tggtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGTGGCCG‑CTa < 2:502465/117‑1 (MQ=255) ggtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCAt < 1:1386427/150‑1 (MQ=255) gCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGaa < 2:1178431/150‑1 (MQ=255) aGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGc < 1:1004113/150‑1 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAAt > 1:190998/1‑116 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAAt < 2:190998/116‑1 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGaa < 2:1644383/141‑1 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGaa > 1:1644383/1‑141 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCAcc > 2:1627435/1‑150 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCAcc > 2:753426/1‑150 (MQ=255) aCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCAccc > 1:1918362/1‑150 (MQ=255) ccAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑cctag < 1:1799979/103‑5 (MQ=255) ccAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑cctag > 2:1799979/1‑99 (MQ=255) ccAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCg > 1:772539/1‑150 (MQ=255) gTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTa < 2:984108/150‑1 (MQ=255) ttttCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTAc > 1:1073856/1‑150 (MQ=255) cATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCCTA‑GCGGCCCCg > 2:766535/1‑102 (MQ=255) cATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCCTA‑GCGGCCCCg < 1:766535/102‑1 (MQ=255) gACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGc > 1:710078/1‑150 (MQ=255) ggCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTc < 1:410241/150‑1 (MQ=255) aTGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTc > 2:771313/1‑150 (MQ=255) acCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCAt > 1:567269/1‑110 (MQ=255) acCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCAt < 2:567269/110‑1 (MQ=255) acCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTcaccca < 1:216716/150‑1 (MQ=255) aGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACccacca > 1:953098/1‑150 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCaccaccacc > 2:1258591/1‑150 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCaccaccacc > 1:1691860/1‑150 (MQ=255) aGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTAc < 2:1695584/119‑1 (MQ=255) aGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTAc > 1:1695584/1‑119 (MQ=255) aGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGGTGACCTGGTAAACGGCAGGAAGAA‑AGCGGGGGCCCCGAATCATACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCAcctc < 1:611089/150‑1 (MQ=255) cGAGGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTa < 1:1405647/150‑1 (MQ=255) agAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTa < 2:1735973/149‑1 (MQ=255) aGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAAc < 2:1332563/150‑1 (MQ=255) acCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGAt < 1:203582/150‑1 (MQ=255) gATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCAc < 1:1695641/150‑1 (MQ=255) aTACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACt > 2:1599021/1‑150 (MQ=255) aTACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACt < 2:1787670/150‑1 (MQ=255) aCCTTTTCGGTGGGCGCCGGGTTTACCTGGTCAGCGGCCGGGTCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATCGAACCGTCCACCTGCTAGCCAAGTAGCATTCATCACCCACCATCACCTCCTTAAACTGATCACTCa < 2:707002/150‑1 (MQ=255) aCCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCa < 2:772539/150‑1 (MQ=255) aCCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCa < 1:1627435/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCACGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 1:482965/150‑1 (MQ=255) aCCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTCAGCCCAAGGAACCGCCCACCCGCTACCCAAGTAGCCTTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGa > 2:464315/1‑150 (MQ=255) aCCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGa < 1:771313/150‑1 (MQ=255) aCCTGGTAAGCGGACGGGGCCG‑CTAGGCGGCCCAGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGa < 2:865220/150‑1 (MQ=255) cTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCACATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATg > 2:463915/1‑150 (MQ=255) tGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATgc > 1:173365/1‑150 (MQ=255) tAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCACCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGga < 1:1274505/136‑1 (MQ=255) tAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCACCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGga > 2:1274505/1‑136 (MQ=255) taGCGGCCCCGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCTTGCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCg > 1:1554548/2‑133 (MQ=255) taGCGGCCCCGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCg < 2:1554548/132‑1 (MQ=255) aGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGcagcag < 2:1691860/150‑1 (MQ=255) gCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACAAGGTCTTTTCCGCCCATGGAAGCGCCCACCCGCTACCCCCCGACCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAgg < 1:888761/150‑1 (MQ=255) attcGGGGCCG‑CATAGCGGCACCAAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCt > 2:168842/4‑150 (MQ=255) ttcGGGGCCGCCTA‑GCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAAc < 1:185924/102‑1 (MQ=255) ttcGGGGCCGCCTA‑GCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAAc > 2:185924/3‑104 (MQ=255) ttcGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGAt < 2:1140040/137‑1 (MQ=255) ttcGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGAt > 1:1140040/3‑139 (MQ=255) gCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTc > 2:1775139/1‑150 (MQ=255) gCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTc > 2:126188/1‑150 (MQ=255) ccGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTca > 2:1769217/1‑82 (MQ=255) ccGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTca < 1:1769217/82‑1 (MQ=255) ggggCCGCCTA‑GCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCAcc > 1:1622906/1‑117 (MQ=255) ggggCCGCCTA‑GCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCAcc < 2:1622906/117‑1 (MQ=255) gggCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTCCCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATaa < 2:639357/150‑1 (MQ=255) ccG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAacga < 2:710078/150‑1 (MQ=255) | TGGCGCTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCG‑CTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAACGA > NC_002947/3049935‑3050231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |