Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,962,626:1 +T 5.1% coding (780/1152 nt) PP_3492 → acyl‑CoA dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,962,6261.T 5.1% 315.9 / 9.7 79coding (780/1152 nt)PP_3492acyl‑CoA dehydrogenase
Reads supporting (aligned to +/- strand):  ref base . (45/30);  new base T (2/2);  total (47/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01

TGCGCGGTCACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTGCGCAGTGCCG  >  NC_002947/3962477‑3962774
                                                                                                                                                      |                                                                                                                                                     
tGCGCGGTCACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGaa                                                                                                                                                        >  1:1012897/1‑150 (MQ=255)
tGCGCGGTCACCTTCGACAACTGCCGCATTCCTGCCGACCGTATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGaa                                                                                                                                                        <  1:18328/150‑1 (MQ=255)
 gcgcGGTCACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCAGTGGCATCGCCCGCGCCGCATTCGAA‑g                                                                                                                                                      <  1:50377/150‑1 (MQ=255)
      gTCACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGACCGCGCCGCATTCGAA‑gcagcg                                                                                                                                                 >  1:1463018/1‑150 (MQ=255)
        cACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCt                                                                                                                                               <  2:1746416/150‑1 (MQ=255)
         aCCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGC‑TTCGAATGCGgcgcgg                                                                                                                                              <  1:1653127/150‑3 (MQ=255)
           cTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑Gt                                                                                                                                           >  1:454707/1‑150 (MQ=255)
           cTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCACTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑Gt                                                                                                                                           >  1:1224349/1‑150 (MQ=255)
           cTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCAACAATCGAAGGCGGCCGTATCGGCATTGCCGCACGCCGCTTTGTGATTGCCCGCGCCGCATTCGCA‑GCGGCGCTG‑Gt                                                                                                                                           >  1:424266/1‑150 (MQ=255)
              cGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTa                                                                                                                                        >  2:1341179/1‑150 (MQ=255)
                aCAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACt                                                                                                                                      >  1:1684022/1‑150 (MQ=255)
                aCAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTAGAA‑GCGGCGCTG‑GTCTACt                                                                                                                                      >  1:518948/1‑150 (MQ=255)
                    cTGCCGCATTCCTGCCGCCAATCTCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTcgcg                                                                                                                                  >  1:242424/1‑150 (MQ=255)
                     tGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGt                                                                                                                                 >  2:1729761/1‑150 (MQ=255)
                     tGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGt                                                                                                                                 >  2:1727609/1‑150 (MQ=255)
                       ccGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGa                                                                                                                               >  1:1486237/1‑150 (MQ=255)
                        cGCATTCTTGCCGCCAATGGCCGCGGTGAGCGGGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GAGGCGCTG‑GTCTACTCGCGTGAc                                                                                                                              <  2:1250033/150‑1 (MQ=39)
                               cTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATAc                                                                                                                       >  2:1775169/1‑150 (MQ=255)
                               cTGCCGCCAACATCCTCGGTGAGCGTGGCAAGGGCCTGGTCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATAc                                                                                                                       <  1:1062914/150‑1 (MQ=255)
                                tGCCGCCAATATCCTCGGTGAGCGTGGGAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGGGACCGCAGACa                                                                                                                      >  1:178967/1‑150 (MQ=255)
                                   cgccAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGtt                                                                                                                   <  2:1917179/150‑1 (MQ=255)
                                    gccAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCTTCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGttt                                                                                                                  <  2:1808510/150‑1 (MQ=255)
                                    gccAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGtgt                                                                                                                  >  1:790668/1‑148 (MQ=255)
                                     ccAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCACGCTCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTg                                                                                                                 <  1:612213/150‑1 (MQ=255)
                                      cAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTgg                                                                                                                <  2:431726/150‑1 (MQ=255)
                                       aaTATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGc                                                                                                               <  2:768360/150‑1 (MQ=255)
                                           tCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGAGTGCCCGCATACAGTTTGGCAAGc                                                                                                           <  2:1460928/150‑1 (MQ=255)
                                            ccTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGcc                                                                                                          >  1:595654/1‑150 (MQ=255)
                                              tCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGTCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATGCGAG‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGa                                                                                                        >  2:1159304/1‑150 (MQ=255)
                                                 gTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCa                                                                                                     >  2:1645084/1‑150 (MQ=255)
                                                  tGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCaa                                                                                                    <  2:1799371/150‑1 (MQ=255)
                                                   gAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAAc                                                                                                   <  2:424266/150‑1 (MQ=255)
                                                      cGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGaa                                                                                                >  1:1048260/1‑150 (MQ=255)
                                                          gCAAGGGCCTGGCCCTTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGCCCGCATACAGTTTGGCAAGCCGATCAACGAACAcc                                                                                            >  2:391981/1‑150 (MQ=255)
                                                              gggCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCagag                                                                                        <  1:297287/150‑1 (MQ=255)
                                                                  cTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCAtt                                                                                    >  1:1092420/1‑150 (MQ=255)
                                                                       cATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCaa                                                                               >  2:435786/1‑150 (MQ=255)
                                                                          tGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCCGAGCCTTGCCAACct                                                                            <  2:1012897/150‑1 (MQ=255)
                                                                             ccTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACctgct                                                                         >  2:1244959/1‑150 (MQ=255)
                                                                             ccTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACctgct                                                                         >  2:211621/1‑150 (MQ=255)
                                                                             ccTGTCCAACCGCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGCCCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACctgct                                                                         <  1:41512/150‑1 (MQ=255)
                                                                                 tCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGcc                                                                     >  2:883895/1‑150 (MQ=255)
                                                                                   cAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGa                                                                   >  1:1576403/1‑150 (MQ=255)
                                                                                    aaCCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATAGCACCTTCGGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGAc                                                                  >  2:927953/1‑150 (MQ=255)
                                                                                       cTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtg                                                               >  2:1101661/1‑150 (MQ=255)
                                                                                       cTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtg                                                               >  2:637024/1‑150 (MQ=255)
                                                                                        tCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtgc                                                              >  2:132883/1‑150 (MQ=255)
                                                                                          ggaGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGTATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtgcag                                                            <  2:423400/148‑1 (MQ=255)
                                                                                          gAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtgcag                                                            <  2:595654/150‑1 (MQ=255)
                                                                                          gAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtgcag                                                            >  2:1595226/1‑150 (MQ=255)
                                                                                                ggcCGCATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACAtgcaggtgcag                                                      >  1:164445/1‑150 (MQ=255)
                                                                                                      aTCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAAc                                                >  2:906879/1‑150 (MQ=255)
                                                                                                       tCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAaca                                                                                              <  2:413839/103‑1 (MQ=255)
                                                                                                       tCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAaca                                                                                              >  1:413839/1‑103 (MQ=255)
                                                                                                       tCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAAcg                                               >  1:26082/1‑150 (MQ=255)
                                                                                                       tCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGCTGCAGGTGAAcg                                               >  2:42885/1‑150 (MQ=255)
                                                                                                         ggCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAAcgcc                                             <  1:211621/150‑1 (MQ=255)
                                                                                                          gCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCAtt                                                                                    >  2:1116139/1‑110 (MQ=255)
                                                                                                          gCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCAtt                                                                                    <  1:1116139/110‑1 (MQ=255)
                                                                                                             ttGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCAc                                         >  1:938846/1‑150 (MQ=255)
                                                                                                             ctGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCAc                                         <  2:1224349/149‑1 (MQ=255)
                                                                                                                  gccCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTg                                    <  2:1515751/150‑1 (MQ=255)
                                                                                                                  gccCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTg                                    >  2:195094/1‑150 (MQ=255)
                                                                                                                      aGGCCTTGGGCATCGCCCGCGCCGCATTCGAC‑ACGATGTTGTCGCTTCTTTAATG‑GCGCTTACAGTTTGGTAAGCGGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGa                                >  1:329957/1‑150 (MQ=255)
                                                                                                                         ccTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATcc                             >  2:249953/1‑150 (MQ=255)
                                                                                                                         ccTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATcc                             >  2:1468731/1‑150 (MQ=255)
                                                                                                                          cTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCAc                                         <  1:343937/137‑1 (MQ=255)
                                                                                                                          cTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCAc                                         >  2:343937/1‑137 (MQ=255)
                                                                                                                               gCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACTGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATg                       <  1:1337222/150‑1 (MQ=255)
                                                                                                                               gCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATg                       <  1:195094/150‑1 (MQ=255)
                                                                                                                                 aTCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATgcc                     <  1:1101661/150‑1 (MQ=255)
                                                                                                                                     ccagcgcCGC‑TTCGAATGCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGccgccc                 >  2:93001/4‑150 (MQ=255)
                                                                                                                                      cagcgcCGC‑TTCGAATGCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGccgcccg                >  2:931906/3‑150 (MQ=255)
                                                                                                                                         cgccgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCTATCAACGAACACCAGAGCATTGCCACCCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCt             <  1:962863/150‑1 (MQ=255)
                                                                                                                                         cgccgcATTCGAA‑GCGGCGCTG‑GTCCACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCt             <  2:374007/150‑1 (MQ=255)
                                                                                                                                         cgccgc‑TTCGAATGCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCt             <  1:931906/150‑1 (MQ=255)
                                                                                                                                            cgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGc                          <  2:1122713/134‑1 (MQ=255)
                                                                                                                                            cgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGc                          >  1:1122713/1‑134 (MQ=255)
                                                                                                                                            cgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTgcg          >  2:276316/1‑150 (MQ=255)
                                                                                                                                            cgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTgcg          <  2:164445/150‑1 (MQ=255)
                                                                                                                                            cgcATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTgcg          >  1:730106/1‑150 (MQ=255)
                                                                                                                                              cATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTGCGCa        >  2:1693724/1‑150 (MQ=255)
                                                                                                                                              cATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTGCGCa        <  1:927953/150‑1 (MQ=255)
                                                                                                                                                    aa‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTTATCCTGCATGCCGCCCGCCTGCGCAGTGCCg  <  1:1645084/150‑1 (MQ=255)
                                                                                                                                                    aa‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTGCGCAGTGCCg  <  2:501987/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TGCGCGGTCACCTTCGACAACTGCCGCATTCCTGCCGCCAATATCCTCGGTGAGCGTGGCAAGGGCCTGGCCATTGCCCTGTCCAACCTCGAAGGCGGCCGTATCGGCATTGCCGCCCAGGCCTTGGGCATCGCCCGCGCCGCATTCGAA‑GCGGCGCTG‑GTCTACTCGCGTGACCGCATACAGTTTGGCAAGCCGATCAACGAACACCAGAGCATTGCCAACCTGCTGGCCGACATGCAGGTGCAGGTGAACGCCGCACGTTTGCTGATCCTGCATGCCGCCCGCCTGCGCAGTGCCG  >  NC_002947/3962477‑3962774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑