| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 86750 = | 72 (0.970) | 9 (0.140) | 6/222 | NT | 13.1% | intergenic (‑33/+112) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein |
| ? | NC_002947 | 86841 = | 56 (0.860) | intergenic (‑124/+21) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein | |||||
TTACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86914‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATC > NC_002947/86841‑86988 TTACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGACTATGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATG > 2:627539/1‑150 ACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGC > 2:1227940/1‑150 CAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTC > 1:1268063/1‑150 CAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTC < 1:787318/150‑1 cATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGG < 1:1706012/149‑1 GATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGG > 1:1816542/1‑150 CAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCC > 1:1326098/1‑150 GGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTT > 2:840551/1‑150 GCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCGCGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTAACTCCGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTC > 1:1453564/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGAC < 2:472411/110‑1 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGAC > 1:472411/1‑110 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGA > 1:1542129/1‑90 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGA < 2:1542129/90‑1 CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTCGGTTTGTTGCTTTGTGAGATTACAGTATGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCG > 1:604205/1‑150 GCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGC < 2:1326098/150‑1 CCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCA > 2:931504/1‑150 CCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCA < 1:1733428/150‑1 TCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCC < 2:1207734/129‑1 TCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCC > 1:1207734/1‑129 CCACAGGGTTGGTGTGTTGCTTTGTGATATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCA > 2:1894984/1‑111 CCACAGGGTTGGTGTGTTGCTTTGTGATATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCA < 1:1894984/111‑1 CCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAG > 1:817441/1‑150 CCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTAATCGAAG < 2:1634658/150‑1 CACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGC > 2:61745/1‑150 atAGGGTTGGTGGGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCT > 2:1507375/3‑150 GGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATC < 1:931504/150‑1 GGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATC < 1:377866/150‑1 TTACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/86914‑86750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCTGATC > NC_002947/86841‑86988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |