| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 453412 = | 54 (0.720) | 3 (0.040) | 3/242 | NT | 5.3% | intergenic (+46/‑102) | aruC/yqaE | acetylornithine aminotransferase/membrane protein |
| ? | NC_002947 | 453444 = | 56 (0.790) | intergenic (+78/‑70) | aruC/yqaE | acetylornithine aminotransferase/membrane protein | |||||
TCCATGCGAGTCTCTCCTGAAGGGTTACATCAAAGACTAGCTCCCAGCCGTAGAGGTTCCACAGGCAAAAAAAAACGCCCCGGGCC‑GAATGAAACAGGCCAGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/453518‑453412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgTTTTTTTTTGCCTGTGGAACCTCTACGGCTGGGAGCTAGTCTTTGATGTAACCCTTCAGGAGAGACTCGCATGGACTTTATTCGCATCATCATCGCCATTCTTCTGCCACCGCTGGGCGTGTTTCTGCAGGTGGGGTTTGGCGGGGC > NC_002947/453444‑453590 TCCATGCGAGTCTCTCCTGAAGGGTTACATCAAAGACTAGCTCCCAGCCGTAGAGGTTCCACAGGCAAAAAAAAACGCCCCTGGCCTGTTTCATTC‑GGCCCGGGGCGTTTTTTTTTGCCTGT < 1:267054/122‑1TCCATGCGAGTCTCTCCTGAAGGGTTACATCAAAGACTAGCTCCCAGCCGTAGAGGTTCCACAGGCAAAAAAAAACGCCCCTGGCC‑TGTTTCATTCGGCCCGGGGCGTTTTTTTTTGCCTGT > 2:267054/1‑122 AAAAAAAAACGCCCCGGGCC‑GAATGAAACAGGCCAGGGGCGTTTTTTTTTGCCTGTGGAACCTCTACGGCTGGGAGCTAGTCTTTGATGTAACCCTTCAGGAGAGACTCGCATGGACTTTATTCGCATCATCATCGCCATTCTTCTGCCA > 1:777954/1‑150 GGGCGTTTTTTTTTGCCCGTGGAACCTCTACGGCTGGGAGCTAGTCTTTGATGTAACCCTTCAGGAGAGACTCGCATGGACTTTATTCGCATCATCATCGCCATTCTTCTGCCACCGCTGGGCGTGTTTCTGCAGGTGGGGTTTGGCGGG < 2:74380/150‑1 GCGTTTTTTTTTGCCTGTGGAACCTCTACGGCTGGGAGCTAGTCTTTGATGTAACCCTTCAGGAGAGACTCGCATGGACTTTATTCGCATCATCATCGCCATTCTTCTGCCACCGCTGGGCGTGTTTCTGCAGGTGGGGTTTGGCGGGGC > 2:1441796/1‑150 TCCATGCGAGTCTCTCCTGAAGGGTTACATCAAAGACTAGCTCCCAGCCGTAGAGGTTCCACAGGCAAAAAAAAACGCCCCGGGCC‑GAATGAAACAGGCCAGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/453518‑453412‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcgTTTTTTTTTGCCTGTGGAACCTCTACGGCTGGGAGCTAGTCTTTGATGTAACCCTTCAGGAGAGACTCGCATGGACTTTATTCGCATCATCATCGCCATTCTTCTGCCACCGCTGGGCGTGTTTCTGCAGGTGGGGTTTGGCGGGGC > NC_002947/453444‑453590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |