New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	478264 =	28 (0.380)	9 (0.160)	8/194	NT	31.9%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	17 (0.300)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase

GGCTGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/478441‑478264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggccgGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCACCGCTCGCGCCGCCGCTGCTGCGCCTCGCAGG  >  NC_002947/478359‑478500                                                                                                                                                                                                                                                                                                                                  GGCTGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGT                                                                                                                                                                            >  1:1298620/1‑150   CTGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTCCAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGGCGTAG                                                                                                                                                                          >  2:1233515/1‑150   CTGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAG                                                                                                                                                                          <  1:727005/150‑1    TGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGG                                                                                                                                                                         >  1:350682/1‑150       CCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGC                                                                                                                                                                      <  1:1206751/150‑1       CCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGAGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGC                                                                                                                                                                      >  1:314089/1‑150           TCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGT                                                                                                                                                                  <  1:340652/150‑1             AGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTT                                                                                                                                                                >  1:1012195/1‑150               GCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCGCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCGGAGGTTGGGCTGAGCCCGTCGGGGGAGGGGGGTTAC                                                                                                                                                              >  2:641509/1‑150                      GCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAA                                                                                                                                                       <  1:1019232/150‑1                      GCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAA                                                                                                                                                       <  1:635297/150‑1                         AAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAG                                                                                                                                                    <  2:1844074/150‑1                          AGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGG                                                                                                                                                   <  2:350682/150‑1                               tccAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGaa                                                                                                                                              >  2:1918420/4‑148                               TCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACC                                                                                                                                                             <  1:457886/135‑1                               TCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACC                                                                                                                                                             >  2:457886/1‑135                                                            GCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAG                                                                                                                                                                          <  1:1902292/93‑1                                                            GCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAG                                                                                                                                                                          >  2:1902292/1‑93                                                                                                GGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCC                                                                                                                                                 >  1:421603/1‑82                                                                                                GGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCC                                                                                                                                                 <  2:421603/82‑1                                                                                                      ACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGA                                                                       >  2:22838/1‑150                                                                                                       CCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCT                                                                                               >  1:1579489/1‑125                                                                                                       CCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCT                                                                                               <  2:1579489/125‑1                                                                                                       CCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGAC                                                                      >  2:488836/1‑150                                                                                                        CCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTT                                                                                             >  2:775735/1‑126                                                                                                        CCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTT                                                                                             <  1:775735/126‑1                                                                                                         CGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGC                                                                                                                                                  >  1:1926173/1‑72                                                                                                         CGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGC                                                                                                                                                  <  2:1926173/72‑1                                                                                                                ACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCC                                                             >  2:158728/1‑150                                                                                                                     GGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCT                                                        <  1:158728/150‑1                                                                                                                                 GAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGC                                            <  1:22838/150‑1                                                                                                                                                                 TTACCCGCGAAGAGGCCGATAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCACCGCTCGCGCCGCCGCTGCTGC            <  1:488836/150‑1                                                                                                                                                                     CCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCC                                                            <  1:789000/98‑1                                                                                                                                                                     CCGCGAAGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCC                                                            >  2:789000/1‑98                                                                                                                                                                           AGAGGCCGGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCACCGCTCGCGCCGCCGCTGCTGCGCCTCGCAGG  <  1:1854218/150‑1                                                                                                                                                                                                                                                                                                                                  GGCTGACCGGTCAGGCACTGGGCGAAGCACTCAAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/478441‑478264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggtttacccgcgaagaggccgGTAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCTTGCACCAACGGCTTCACATCCACCGCTCGCGCCGCCGCTGCTGCGCCTCGCAGG  >  NC_002947/478359‑478500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.