New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 655945 | 64 (0.860) | 4 (0.050) | 4/248 | NT | 6.0% | coding (401/1356 nt) | PP_0563 | two‑component system response regulator |
? | NC_002947 | = 655976 | 63 (0.870) | coding (370/1356 nt) | PP_0563 | two‑component system response regulator |
GGCGCCGGCCAGTACACGCTCGGTGTACATGGCCTGTGTGCGCGAATCGTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/655794‑655945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCAGGACTTTCTCACCGGCAGTCTGGAAGCTTCCAGCCTGCTGGAAAAGGTCGAACTGCTGACCAACACCGCCCCTCACGA < NC_002947/655976‑655867 GGCGCCGGCCAGTACACGCTCGGTGTACATGGCCTGTGTGCGCGAATCGTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTC > 2:82406/1‑150 GGCGCCGGCCAGTACACGCTCGGTGTACATGGCCTGTGTGCGCGAATCGTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTC < 2:95389/150‑1 GTGCGCGAATCGTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCTACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCAGGA < 2:643955/150‑1 ATCGTCGATGATCAGCACGCGTAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCTACCCGCCTTGCCGCAGTGCTCGCCGGCGGTCAGGACTTTCTCA < 2:805254/150‑1 GTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTC < 1:683774/102‑1 GTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTC > 2:683774/1‑102 AGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCTACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCA > 1:1860860/1‑90 AGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCTACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCA < 2:1860860/90‑1 CCTACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCAGGACTTTCTCACCGGCAGTCTGGAAGCTTCCAGCCTGCTGGAAAAGGTCGAACTGCTGACCAACACCGCCCCTCACGA > 1:1358177/1‑113 CCTACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCAGGACTTTCTCACCGGCAGTCTGGAAGCTTCCAGCCTGCTGGAAAAGGTCGAACTGCTGACCAACACCGCCCCTCACGA < 2:1358177/113‑1 GGCGCCGGCCAGTACACGCTCGGTGTACATGGCCTGTGTGCGCGAATCGTCGATGATCAGCACGCGCAACGGGTCGTGAGGGGCGGTGTTGGTCAGCAGTTCGACCTTTTCCAGCAGGCTGGAAGCTTCCAGACTGCCGGTGAGAAAGTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/655794‑655945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctACCCGCCTTGCCGCAGTGCGCGCCGGCGGTCAGGACTTTCTCACCGGCAGTCTGGAAGCTTCCAGCCTGCTGGAAAAGGTCGAACTGCTGACCAACACCGCCCCTCACGA < NC_002947/655976‑655867 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |