| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 726900 = | 52 (0.700) | 7 (0.110) | 5/226 | NT | 8.7% | intergenic (‑144/+123) | PP_0620/PP_0621 | GntR family transcriptional regulator/hypothetical protein |
| ? | NC_002947 | = 5571457 | 101 (1.520) | intergenic (+28/+113) | queG/yicG | epoxyqueuosine reductase/inner membrane protein | |||||
GCCCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/727058‑726900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGCCCAAC < NC_002947/5571457‑5571309 GCCCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCC > 1:1513149/1‑150GCCCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCC > 1:556193/1‑150 CCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCTTCTTCTCCGTTGTTCGCGGGCACGCCCGC > 2:310547/1‑150 CCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGC > 1:578559/1‑150 ACCTGCAGCAGGCCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTC < 2:6754/150‑1 TGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCA > 1:315742/1‑150 GCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGATGGCGCATGCTCTGAGGCTGG < 2:917943/95‑1 GCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGATGGCGCATGCTCTGAGGCTGG > 1:917943/1‑95 CCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTC > 2:165342/1‑150 CCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTC > 1:1227400/1‑150 CCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGT < 1:1496593/94‑1 CCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGT > 2:1496593/1‑94 GCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCA < 1:165342/150‑1 GCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGC < 2:1227400/150‑1 CTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATT < 1:668915/150‑1 CCCCCATGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACACGTGCTCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGC < 1:423115/150‑1 CCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGC < 1:1602736/150‑1 CCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGT < 1:481211/99‑1 CCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGT > 2:481211/1‑99 CCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGCC > 2:1104351/1‑150 CCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCGGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGCC < 1:903591/150‑1 ACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCT < 1:623104/103‑1 ACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCT > 2:623104/1‑103 CAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGCCCAA < 1:1314625/150‑1 AAGGATGCCGCAAGCTCTAAGGCTGGACGCTATTGAGCTCCGTGACGGGCCAGCGCCCACCCCACATGCTCGCTCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCCTGGATGGAGAATCGCCCAAC > 2:807543/1‑150 GCCCACCTGCAGCAGGGCCCTGGCCACCAAGGCTGAACACGATGTCTGTTCAATCCTGAAACCAATTCGAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/727058‑726900‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCACATGCTCGCGCACCAATTCCGATTCATCGTCACGCCTGGCCTTCAGCGCCTCGATCACCGGAATCGTGGAGGGCGCATTGCCCAAC < NC_002947/5571457‑5571309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |