New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 894863 = | 71 (0.950) | 5 (0.070) | 5/242 | NT | 7.0% | coding (183/483 nt) | PP_0777 | glutathione peroxidase |
? | NC_002947 | 894892 = | 66 (0.930) | coding (212/483 nt) | PP_0777 | glutathione peroxidase |
CCCTGCCAGCAGGCGGTACAACGAATGGCGCTGCGGCCCGTTGACCTCCAGCTTGCTCCCCAGCGGGAAACTGACCCCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCCGGCAAACTGGTTGCACGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/895016‑894863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaggAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAGGGGAGGGGGCCGAGTTCCCCGGTGAC > NC_002947/894892‑895040 CCCTGCCAGCAGGCGGTACAACGAATGGCGCTGCGGCCCGTTGACCTCCAGCTTGCTCCCCAGCGGGAAACTGACCCCGTAGTTGAGGCTGCAGCAGTCCTGGATTTAATCTTTCTTACCCATTTCCCGCCCCGCAAACTGGTTGCACGG > 2:1646892/1‑150 CTGCCAGCAGGCGGTACAACGAATGGCGCTGCGGCCCGTTGACCTCCAGCTTGCTCCCCAGCGGGAAACTGACCCCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCCGGCAAACTGGTTGCACGGCA > 1:859862/1‑150 ACGCATGGCGCTGCGGCCCGTTGACCTCCAGCTTGCTCCCCCGCTGGAAACTGACCCCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCGTGCAACCAGTTTGCCGGGCAGGAACCGGGTAGCGAAAA < 2:34783/150‑1 TCCAGCTTGCTCCCCAGCGGGAAACTGACACCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCGTGCAACCAGTTTGCCGGGCAGGAACCGG < 1:745643/114‑1 TCCAGCTTGCTCCCCAGCGGGAAACTGACACCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCGTGCAACCAGTTTGCCGGGCAGGAACCGG > 2:745643/1‑114 TTCCTGCCCGGCAAACTGGTTGCACGGCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACCGGCCTGGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTG > 1:1554871/1‑150 TGCCCGGCAAACTGGTTGCACGGCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAG > 1:410319/1‑150 GGCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAGGGGAGGGGGCCGAGTTCCCCG < 1:1911344/150‑1 GGCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAG > 1:197534/1‑86 GGCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAG < 2:197534/86‑1 GCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTT < 1:1839087/111‑1 GCAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTT > 2:1839087/1‑111 CAGGAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAGGGGAGGGGGCCGAGTTCCCCGGT > 1:906728/1‑150 GAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAGGGGAGGGGGCCGAGTTCCCCGGTGAC > 2:137569/1‑150 CCCTGCCAGCAGGCGGTACAACGAATGGCGCTGCGGCCCGTTGACCTCCAGCTTGCTCCCCAGCGGGAAACTGACCCCGTAGTTGAGGCTGCAGAAGTCCTGGATTTCCTTTTCGCTACCCGGTTCCTGCCCGGCAAACTGGTTGCACGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/895016‑894863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaggAACCGGGTAGCGAAAAGGAAATCCAGGACTTCTGCAGCCTCAACTACGGGGTCAGTTTCCCGCTGGGGAGCAAGCTGGAGGTCAACGGGCCGCAGCGCCATTCGTTGTACCGCCTGCTGGCAGGGGAGGGGGCCGAGTTCCCCGGTGAC > NC_002947/894892‑895040 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |