| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1064963 = | 92 (1.230) | 10 (0.140) | 8/242 | NT | 10.5% | intergenic (+17/+96) | PP_0922/PP_0923 | hypothetical protein/acyltransferase |
| ? | NC_002947 | 1065041 = | 82 (1.150) | intergenic (+95/+18) | PP_0922/PP_0923 | hypothetical protein/acyltransferase | |||||
GCTGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1065116‑1064963‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATTGGC > NC_002947/1065041‑1065185 GCTGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGG < 1:148501/150‑1 CTGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGC < 2:1332850/150‑1 CTGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGC > 1:1863472/1‑150 TGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCC > 1:843032/1‑150 GTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCA < 2:1282729/150‑1 TTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAG > 2:1038924/1‑150 CTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGC > 2:756178/1‑89 CTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:756178/89‑1 GTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCC > 1:1157363/1‑150 GTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCG < 2:937919/120‑1 GTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCG > 1:937919/1‑120 TGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAAC > 1:1158550/1‑150 CCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCT > 2:619338/1‑150 CCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTG > 2:568369/1‑150 CGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCT > 2:1151573/1‑91 CGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCT < 1:1151573/91‑1 CGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTCACCCGCGAAAGGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGT > 2:67550/1‑150 AGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGT < 2:1158550/150‑1 GGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCACCCCCGAACAGCGCCAGGCGAATCGTCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATCGG > 2:749409/1‑150 GGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAA < 1:1817083/78‑1 GGCCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAA > 2:1817083/1‑78 GCCAGAACAGGCAGTGCAGGCAGTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATTGGC < 1:1581945/150‑1 CCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATTGG < 1:1729380/148‑1 CCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATTGG > 2:1729380/1‑148 CCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGC > 1:149601/1‑94 CCAGAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGC < 2:149601/94‑1 GCTGTTCGGGGTTGAAGACGTGGAGATGGCGCCACGTCGGCAGGCGCGGGCTGCCTGAATGCCTGCACTGCCTGTTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACACCGAGCGCATTGCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1065116‑1064963‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagAACAGGCAGTGCAGGCATTCAGGCAGCCCGCGCCTGCCGACGTGGCGCCATCTCCACGTCTTCAACCCCGAACAGCGCCAGGTGAATCGCCTGTTGCGCCTGCAACGCCAGCACCGCACGTTCCTTGCCCACGCTACCTATTGGC > NC_002947/1065041‑1065185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |