New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1087589	74 (0.990)	5 (0.070)	4/246	NT	6.3%	coding (439/1359 nt)	pmbA	regulatory protease
	?	NC_002947	= 1087615	76 (1.050)					coding (465/1359 nt)	pmbA	regulatory protease

GAGGATGAATGCTCGGGCTTGGCCGACGCAGCGCTGATGGCGCGTGAAATCCCGGACCTGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1087469‑1087589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgCGGGTCGGCGTCGAACGCCGCCGCCTCGCAGGC  <  NC_002947/1087615‑1087583                                                                                                                                                            GAGGATGAATGCTCGGGCTTGGCCGACGCAGCGCTGATGGCGCGTGAAATCCCGGACCTGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCGAGG‑‑CGGCGTCGAACGCCGCCGCCTCGCAG    <  1:747942/150‑1                                                    CCGGACCTGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCGCGGGTCGGCGTCGAACGCCGCCGCCTCGCAG    <  1:370630/101‑1                                                    CCGGACCTGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCGCGGGTCGGCGTCGAACGCCGCCGCCTCGCAG    >  2:370630/1‑101                                                           TGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCGCGGGTCGGCGTCGAACGCCGCCGCCTCGCAGGC  >  1:1292144/1‑96                                                           TGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCGCGGGTCGGCGTCGAACGCCGCCGCCTCGCAGGC  <  2:1292144/96‑1                                                                                                                                                            GAGGATGAATGCTCGGGCTTGGCCGACGCAGCGCTGATGGCGCGTGAAATCCCGGACCTGGACCTGTACCACGACTGGGATATCGAGCCCGAGAAGGCCATCGAAATGGCCCTGGCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1087469‑1087589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgCGGGTCGGCGTCGAACGCCGCCGCCTCGCAGGC  <  NC_002947/1087615‑1087583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.